Gene
| Gene Model ID | pfu_aug2.0_181.1_03762 |
|---|---|
| Locus | scaffold181.1 : 344229 ... 365801 : - |
| To GenomeBrowser | scaffold181.1:344229..365801 |
| Genes list of scaffold | scaffold181.1 |
| Synonym | pfu_aug1.0_14108.1_03441 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_181.1_03762.t1 | 1 | 1 | CLCA_N | 8 | 126 | 6.0e-26 | 91.2 | 5.6e-29 | 1.0e-25 | 90.4 |
| pfu_aug2.0_181.1_03762.t1 | 2 | 1 | DUF1973 | 182 | 279 | 4.2e-12 | 45.8 | 0.24 | 450.0 | 0.1 |
| pfu_aug2.0_181.1_03762.t1 | 2 | 1 | VWA_CoxE | 183 | 232 | 3.1e-10 | 39.5 | 1.0e-07 | 0.00019 | 20.6 |
| pfu_aug2.0_181.1_03762.t1 | 1 | 1 | VWA_2 | 215 | 393 | 1.5e-19 | 70.7 | 1.3e-22 | 2.4e-19 | 70.1 |
| pfu_aug2.0_181.1_03762.t1 | 1 | 1 | VWA | 215 | 384 | 2.5e-18 | 66.4 | 2.3e-21 | 4.2e-18 | 65.6 |
| pfu_aug2.0_181.1_03762.t1 | 1 | 1 | DUF1194 | 215 | 367 | 1.1e-09 | 37.6 | 1.2e-12 | 2.2e-09 | 36.6 |
| pfu_aug2.0_181.1_03762.t1 | 2 | 2 | VWA_CoxE | 272 | 332 | 3.1e-10 | 39.5 | 1.9e-06 | 0.0034 | 16.5 |
| pfu_aug2.0_181.1_03762.t1 | 2 | 2 | DUF1973 | 401 | 583 | 4.2e-12 | 45.8 | 5.9e-15 | 1.1e-11 | 44.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_181.1_03762.t1 | gi|585710359|ref|XP_006824532.1| | PREDICTED: calcium-activated chloride channel regulator 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_181.1_03762.t1 | gi|585705877|ref|XP_006823722.1| | PREDICTED: calcium-activated chloride channel regulator 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_181.1_03762.t1 | gi|637293372|ref|XP_003220168.2| | PREDICTED: epithelial chloride channel protein-like [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_181.1_03762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03762.t1 atggaccagacatgcacgtttcggaatgcattcaccgaagcatctaggatactatataaggcaacaaattacacagtata tttcaaaggagttgacatatatattccagaagaatggtcaagcatgagagcctttaaaaatgtaacagggaaaaaaatgg gaaattttcctatcattgttgaccataaaatttataacgattatgtaccagaagttcgtggcttgcaatattgcggtgga tatgggctgttcatgcatttaactccagagtttttatcaaataagcacagaatgtcgcttggagatcgaggaagaaccat tgttcatgaatgggcacacctacgttatggagtgcttgacgaatatccatcaattcaaaaagccaataaaacccttaatt tctacagtgtggaaggaacttggaaacctctggaagagttttgtgatattgacgaccctagtactccttctgcaagaaga cataacagcaatgcagacaatttgcaaaataagtattgcaatggacaaagcatctgggaaattctacgaaaaaatattga tataaatgctacgattccgggctctcctcagatgaacacagacccaacgttccgtgtcttcaaacagcagtctgctttag tagttgttttcgtacttgatgtttccggaagcatgaagaagtcatattcatctttattccagggtaagcgcttgcaaaat cttaggaaagctgcagactcttacatatcagatacagcgaatgataaaacttgggttggaattgtagaatttagcagtgt ggcatatatctgtcacaacattacacgggttacatcagccacagtgcgtaaatcattggtaaatgcattgcccacatctg catcaggacaaacatccattggagctggactagaaaaggcatatcagatgattaagaagcacggcagaaatataacagga gcaaccattctgcttgctacagatggtaaagaaaatacgcgtccatatataaaggacatgaaaccttatataatttctga agacatacgggtaaacgctttagcaatcacagacaaggctgacccaaaaattgaaaagttagccagggatactgatggaa gcagctcattttatcctggatctgataatccctctctcatgaataatgcatttgacaacttggttccacctgatgaagtc tctgttcagattagttcatctgctgtttctattaccaaaggggaggaccaacgtattgaattttatgtcgatgcaagtat gagtcgtgacgtaaaagtccgtatttctgtgtcagaatccaatgtgtctgtgatgacttcaatacagacgccgactggaa agatgatgtatcgtcctagctttaaggacaacactggtagcattaagacctttcatctaaaagggaggaatgagcctgga atgtacctaatacggctttccacgaactctactgacgtcatctccggaggagttgaagtaacatcgaagatgagcggagg gatggcttcacacaggacgaaaaggatggccacaatgcatatggcagttgatgttacaggatggctttctaatgatatat ttcgaatttctcatatgcagaaaatctcagtccatgcttccatattaaaaggttacgcaccgataatttatgggaatgtt tcagcttggatagattatggtagaggaaacgaaatgatcctaccattgaaagatgacggcatcggtaacgggtccggtca tgcaggtaacgggtccggctatgcagatatcgggtccggttatgcagatatcgggtccagttatgctgataacgggtccg gttatgcaggtgacgggtccggtaatgcagataacgggtccgctaatgcaggtaagactcagttctag |
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Protein
| Protein ID | pfu_aug2.0_181.1_03762.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03762.t1 MDQTCTFRNAFTEASRILYKATNYTVYFKGVDIYIPEEWSSMRAFKNVTGKKMGNFPIIVDHKIYNDYVPEVRGLQYCGG YGLFMHLTPEFLSNKHRMSLGDRGRTIVHEWAHLRYGVLDEYPSIQKANKTLNFYSVEGTWKPLEEFCDIDDPSTPSARR HNSNADNLQNKYCNGQSIWEILRKNIDINATIPGSPQMNTDPTFRVFKQQSALVVVFVLDVSGSMKKSYSSLFQGKRLQN LRKAADSYISDTANDKTWVGIVEFSSVAYICHNITRVTSATVRKSLVNALPTSASGQTSIGAGLEKAYQMIKKHGRNITG ATILLATDGKENTRPYIKDMKPYIISEDIRVNALAITDKADPKIEKLARDTDGSSSFYPGSDNPSLMNNAFDNLVPPDEV SVQISSSAVSITKGEDQRIEFYVDASMSRDVKVRISVSESNVSVMTSIQTPTGKMMYRPSFKDNTGSIKTFHLKGRNEPG MYLIRLSTNSTDVISGGVEVTSKMSGGMASHRTKRMATMHMAVDVTGWLSNDIFRISHMQKISVHASILKGYAPIIYGNV SAWIDYGRGNEMILPLKDDGIGNGSGHAGNGSGYADIGSGYADIGSSYADNGSGYAGDGSGNADNGSANAGKTQF |
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