Gene
| Gene Model ID | pfu_aug2.0_181.1_03764 |
|---|---|
| Locus | scaffold181.1 : 399561 ... 407061 : - |
| To GenomeBrowser | scaffold181.1:399561..407061 |
| Genes list of scaffold | scaffold181.1 |
| Synonym | pfu_aug1.0_6107.1_16852 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_181.1_03764.t1 | 1 | 1 | RVT_1 | 33 | 250 | 3.0e-24 | 85.5 | 2.6e-28 | 3.9e-24 | 85.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_181.1_03764.t1 | gi|585645914|ref|XP_006811646.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial [Saccoglossus kowalevskii] | 7.0e-30 |
| pfu_aug2.0_181.1_03764.t1 | gi|585714465|ref|XP_006812863.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial [Saccoglossus kowalevskii] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_181.1_03764.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03764.t1 atggtcacaattctaacaatgttacttaatgctatctttagtctggctcttgtaccaaatgtcttgaagtatggagccat tactccagtttttaagaagaaagggagtgttactgatgctagaaactatcgtggtatcactgtgcttcctgtgattggga aactattagaaattttgataagaaataggatacggaagatattggaaccaattcaaaaccctatgcagcgtggatttact agaaatgcatctccgctttattgtgctctgataattgaagagttcatcagagaatccttagcaaacaaggacccagtata ctctgcttatcttgatgcaaggactgcatttgacgttgtgaaccacaacagcctactgcggaaacttttcaacgctggga ttgaagggaagctatggtctattattcaggattttcacactaatgctgttagtgttgtgaaatgggagggtgctgtttct tcaccattcaatatccaccaaggggtacgtcaaggaggaatcctgagtgccgatctgtataagctttatgtgaatcaact actgaacagactatctgacagtgcactaggagctcatataggtgatactgtctgtaatgcaccaacttgcgcagatgatc tgtcgtcaataagcaaatgttcgacacagcttcagtcgctatgtgatattgctgtagattacagtagaatggaaaaatat gagctgcaaccgctcaaaagtgttatcgtacctgttactggaaaagattgttttagagggatgtcatatgagcattcatt ataa |
|
Protein
| Protein ID | pfu_aug2.0_181.1_03764.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03764.t1 MVTILTMLLNAIFSLALVPNVLKYGAITPVFKKKGSVTDARNYRGITVLPVIGKLLEILIRNRIRKILEPIQNPMQRGFT RNASPLYCALIIEEFIRESLANKDPVYSAYLDARTAFDVVNHNSLLRKLFNAGIEGKLWSIIQDFHTNAVSVVKWEGAVS SPFNIHQGVRQGGILSADLYKLYVNQLLNRLSDSALGAHIGDTVCNAPTCADDLSSISKCSTQLQSLCDIAVDYSRMEKY ELQPLKSVIVPVTGKDCFRGMSYEHSL |
|