Gene
| Gene Model ID | pfu_aug2.0_181.1_03765 |
|---|---|
| Locus | scaffold181.1 : 409842 ... 414041 : - |
| To GenomeBrowser | scaffold181.1:409842..414041 |
| Genes list of scaffold | scaffold181.1 |
| Synonym | pfu_aug1.0_11458.1_10327 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| macrophage migration inhibitory factor variant 1 | GO:0001934 GO:0002682 GO:0008283 GO:0009967 GO:0043066 GO:0044710 GO:1902531 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_181.1_03765.t1 | 1 | 1 | MIF | 2 | 114 | 3.5e-34 | 117.3 | 7.9e-38 | 3.9e-34 | 117.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_181.1_03765.t1 | gi|543362340|ref|XP_005524540.1| | PREDICTED: macrophage migration inhibitory factor-like [Pseudopodoces humilis] | 6.0e-29 |
| pfu_aug2.0_181.1_03765.t1 | gi|564240465|ref|XP_006277066.1| | PREDICTED: macrophage migration inhibitory factor-like [Alligator mississippiensis] | 7.0e-29 |
| pfu_aug2.0_181.1_03765.t1 | gi|542170025|ref|XP_005493393.1| | PREDICTED: macrophage migration inhibitory factor-like [Zonotrichia albicollis] | 2.0e-28 |
| pfu_aug2.0_181.1_03765.t1 | gi|197127546|gb|ACH44044.1| | putative macrophage migration inhibitory factor (MIF) variant 1 [Taeniopygia guttata] | 2.0e-28 |
| pfu_aug2.0_181.1_03765.t1 | gi|525014464|ref|XP_005054823.1| | PREDICTED: macrophage migration inhibitory factor-like [Ficedula albicollis] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_181.1_03765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03765.t1 atgccagtatttgccatttacacaaaccttcctgaagataaaattccagatggttttgtcttaaatgcatcaaaatttct tgcagaacaacttggaaaaccagaaatgtatataacgatgcgtgtccatcctgaccagatgatgagtcacggtgggtcca cagacccgtgcggtagcgtagaagtatacagtatcggagctttaggtgacaaaaaccctgatcacgccgacaaaatagca acatttattgaagacaaacttaaaattcccaaggacaggttttatgtcacctttgttgatatgaagagagaggatgttgg cttcggaggaaaaacatttgctcagattgcaaagaagtag |
|
Protein
| Protein ID | pfu_aug2.0_181.1_03765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03765.t1 MPVFAIYTNLPEDKIPDGFVLNASKFLAEQLGKPEMYITMRVHPDQMMSHGGSTDPCGSVEVYSIGALGDKNPDHADKIA TFIEDKLKIPKDRFYVTFVDMKREDVGFGGKTFAQIAKK |
|