Gene
| Gene Model ID | pfu_aug2.0_181.1_03767 |
|---|---|
| Locus | scaffold181.1 : 435172 ... 438561 : - |
| To GenomeBrowser | scaffold181.1:435172..438561 |
| Genes list of scaffold | scaffold181.1 |
| Synonym | pfu_aug1.0_11458.1_10325 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_181.1_03767.t1 | 2 | 1 | SNARE | 14 | 53 | 6.9e-11 | 41.6 | 2.0e-05 | 0.098 | 12.3 |
| pfu_aug2.0_181.1_03767.t1 | 2 | 2 | SNARE | 145 | 203 | 6.9e-11 | 41.6 | 4.0e-12 | 2.0e-08 | 33.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_181.1_03767.t1 | gi|676496174|ref|XP_009067130.1| | hypothetical protein LOTGIDRAFT_237114 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_181.1_03767.t1 | gi|675859504|ref|XP_009015312.1| | hypothetical protein HELRODRAFT_184904 [Helobdella robusta] | 2.0e-22 |
| pfu_aug2.0_181.1_03767.t1 | gi|556958781|ref|XP_005990226.1| | PREDICTED: synaptosomal-associated protein 29 [Latimeria chalumnae] | 8.0e-22 |
| pfu_aug2.0_181.1_03767.t1 | gi|339245433|ref|XP_003378642.1| | SNARE domain protein [Trichinella spiralis] | 2.0e-21 |
| pfu_aug2.0_181.1_03767.t1 | gi|291229036|ref|XP_002734482.1| | PREDICTED: synaptosomal-associated protein 29-like [Saccoglossus kowalevskii] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_181.1_03767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03767.t1 atgccgtgggtttccgacgatggttggaatctagaaaatgaaatatttcagacacacagatctgaacttttacgacaagg ggagcaactgaaaaacatcgagaggaaaacagccgtgataaatgacaatatgaccacaactcagaaacatctcaacaaca taaagagcgtttttggtggtataaaaaactggtggaacaagggtaaaaccgaacagcagacggaggaatcggacgtcaaa ccaagcagattacaacagacagtggaaagagaaaaaatgtccagaccgcagcacagaaatgtcgatacatcaggatttta tgacaatgataatgatcttgataaaaaatttatggccggtgccaaaacttcgtcatctcataatcagcagtttttcaaac ccgtaacgcacagtgcaagggaagagcagataaatgaaaatttaggtatgatgtctgatgggttgtcaagactgaaagat ctggccgttggattaggggacgaaatcgaaagacaaaatgactttatagacgacagaataaagccaggaatcgatcgtgc aaacctgcgattagaagatcaaaacaaacaaatgaacaggattttaagaaaataa |
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Protein
| Protein ID | pfu_aug2.0_181.1_03767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_181.1_03767.t1 MPWVSDDGWNLENEIFQTHRSELLRQGEQLKNIERKTAVINDNMTTTQKHLNNIKSVFGGIKNWWNKGKTEQQTEESDVK PSRLQQTVEREKMSRPQHRNVDTSGFYDNDNDLDKKFMAGAKTSSSHNQQFFKPVTHSAREEQINENLGMMSDGLSRLKD LAVGLGDEIERQNDFIDDRIKPGIDRANLRLEDQNKQMNRILRK |
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