Gene
| Gene Model ID | pfu_aug2.0_1812.1_08583 |
|---|---|
| Locus | scaffold1812.1 : 45186 ... 49330 : + |
| To GenomeBrowser | scaffold1812.1:45186..49330 |
| Genes list of scaffold | scaffold1812.1 |
| Synonym | pfu_aug1.0_3941.1_30566 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1812.1_08583.t1 | 1 | 1 | NACHT | 84 | 263 | 6.2e-11 | 42.2 | 1.2e-12 | 5.7e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1812.1_08583.t1 | gi|657582932|ref|XP_008295548.1| | PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like [Stegastes partitus] | 3.0e-10 |
| pfu_aug2.0_1812.1_08583.t1 | gi|617468220|ref|XP_007574463.1| | PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like [Poecilia formosa] | 4.0e-10 |
| pfu_aug2.0_1812.1_08583.t1 | gi|658917156|ref|XP_008398341.1| | PREDICTED: NACHT, LRR and PYD domains-containing protein 7-like [Poecilia reticulata] | 1.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1812.1_08583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1812.1_08583.t1 atgcaccgacaaaatgttccggatttcaacaatctgcgtggcaaaatacgctctatcaatgaatccgaggcagacaaaat tcaaatacttcctttcaaaagagacgatactatagaggttgaaaaaatatacgttcaaatatcgatagtagatgaatacg aaaaacgaaatatcacaacgactaatgaaagtgaagtttcaaatctcacaccagaaaagatctttcatgcccaacttgga aaaccagcgcgttttgttttcatgctcggggaggctggatatggaaaaacagtacagtgtcagagaattgcgaaatcatg gtgcgaagcgtggcttcatgaatccaaggaagtaaaagaaataccacattttgcgtctgatatggaaaaatgtctcaaag aatttgaatttcttttcttcgttcaaatgcgtgatgtatcgaacaaacatgtgtccctgataaaaatcatacaggatgta tatagtcaataccatctatcaaaagacagtttaaaaaatatcaaaagaattctcactcacaaccatataaaaagtcttgt tcttctagacggacttgatgattggaatatatctgaagataagagggaacatcttttggataaatggataccaaactgta gggacatgccagcatgtacaattttaatttcaatgaggtcctggaagtttatagatgttgaagtaatatgtcggcgaaaa ttggacagagtaatacgtttaaatggtctgaacgaagattctatgaaacgacttaccacaaacattctatgcaattatat caagataaacatagaatcagacgaattcagacaaagatatcaaagtgttctgaagactatttcctctgtatcatttgagt taaaatccctaatgaaaattccattactagcagttttcacggttcttacattatatgaggaggttgaaactggatattcc cttacaaccttttatctttcaatggttgaggctcttatcaagagatcagtcgaaaagcagcaaactgaagttaaacaaac aacattttgtcaaactgaaacaactttccccagcaaattagaggagtatgcgcttatcactctacacttacctcagttat taaaacttgggaaaatagctttcgaaaatctagtttctgaatattcatcattggtattttgcaccagtcgattgaataca caaattgacaatgaagacttagacctatatcttaggactggactattaattgaagacacaccatcttcgaatgagttaag gaagttccaccaacacaacattcgaataagttttcttcataaaaccattcaagaatttctcgcagctctctacatattct atgggaagagagagaccaatatcataaaatctgtttccgctgaagttaaaacaattgcgaaagtattgaaattttcttac gttcttactttcttgtctggactctctcctggtgttggttgcaaaatatcaagtctcatcaaagaattggcaagcaaaga taaggatatctgcaattatcgtgaccattttgaggctgaaagttatcaaaaagttttctacctatacaatttgcaattac ggtgctatagagaagtaaggggtactaaatcaattaaaacctttgaaaatataggacggaatcctaagttttcgttcaca gatataatcgtaattgctaacgattcggaaaaggtaacaataagagaatcagccgaagttctagaatttcatgcaaacag catcatttcactaaatgttgtaggtatttcggatgaaaaagaagatggaatcaccaatggcgagataaaacatttcttgg ataaaagtttgtctctagagtccctatacatcgatggatatattaatggacactgtagactgttcaataattacagtcaa agaatgtctcgtttacgaacgttaggtttagcgaatgttgcattcaaaggtaacagtcttgaggacttattattgaaaaa gaaatcaacagaaaatatccgtgccttgggactcttataccttaagtcggcggattatttacgcgttgacttcgaatatc gtatgccatcaattcattggatcagcacggggagatcagggtttgtgcggaagattcgttcattgtctacaaaatcaggc cgtcgtccgaagttggagaggagaaataggcttttcacggatttctttgaaatccttccagaatacaaacaattatcaac attgtatataacttacatggaagctgaaacggatagacaaacattccgaaaagttttgccggaattgagaaaattaaaaa cattacatcatattggatatcgtggaagctcaatctatcccattcctgactacgaatatgacgctgaaataataacaatg atcatgcaattgagaaaacttcggaggattcacctccgtgaaatccacttggagaaaaacattctgagtttcgaatttat gacaaaactggaacgtatctggttaggaatgtttgaaatgaactcgcctcgtgactgggaggattttcttttgtcattgt ccaaaattaatacgcttgaaagggttactctatatgacacaaatattggcgctgaagtgttagataaatttaaatcaaag tcttctaggaacttgaatattttaaacatcgaaagtaccagttggtga |
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Protein
| Protein ID | pfu_aug2.0_1812.1_08583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1812.1_08583.t1 MHRQNVPDFNNLRGKIRSINESEADKIQILPFKRDDTIEVEKIYVQISIVDEYEKRNITTTNESEVSNLTPEKIFHAQLG KPARFVFMLGEAGYGKTVQCQRIAKSWCEAWLHESKEVKEIPHFASDMEKCLKEFEFLFFVQMRDVSNKHVSLIKIIQDV YSQYHLSKDSLKNIKRILTHNHIKSLVLLDGLDDWNISEDKREHLLDKWIPNCRDMPACTILISMRSWKFIDVEVICRRK LDRVIRLNGLNEDSMKRLTTNILCNYIKINIESDEFRQRYQSVLKTISSVSFELKSLMKIPLLAVFTVLTLYEEVETGYS LTTFYLSMVEALIKRSVEKQQTEVKQTTFCQTETTFPSKLEEYALITLHLPQLLKLGKIAFENLVSEYSSLVFCTSRLNT QIDNEDLDLYLRTGLLIEDTPSSNELRKFHQHNIRISFLHKTIQEFLAALYIFYGKRETNIIKSVSAEVKTIAKVLKFSY VLTFLSGLSPGVGCKISSLIKELASKDKDICNYRDHFEAESYQKVFYLYNLQLRCYREVRGTKSIKTFENIGRNPKFSFT DIIVIANDSEKVTIRESAEVLEFHANSIISLNVVGISDEKEDGITNGEIKHFLDKSLSLESLYIDGYINGHCRLFNNYSQ RMSRLRTLGLANVAFKGNSLEDLLLKKKSTENIRALGLLYLKSADYLRVDFEYRMPSIHWISTGRSGFVRKIRSLSTKSG RRPKLERRNRLFTDFFEILPEYKQLSTLYITYMEAETDRQTFRKVLPELRKLKTLHHIGYRGSSIYPIPDYEYDAEIITM IMQLRKLRRIHLREIHLEKNILSFEFMTKLERIWLGMFEMNSPRDWEDFLLSLSKINTLERVTLYDTNIGAEVLDKFKSK SSRNLNILNIESTSW |
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