Gene
| Gene Model ID | pfu_aug2.0_1813.1_11876 |
|---|---|
| Locus | scaffold1813.1 : 62491 ... 84275 : - |
| To GenomeBrowser | scaffold1813.1:62491..84275 |
| Genes list of scaffold | scaffold1813.1 |
| Synonym | pfu_aug1.0_6765.1_45514 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar h | GO:0000221 GO:0005524 GO:0005769 GO:0005829 GO:0005903 GO:0007035 GO:0015991 GO:0033181 GO:0046034 GO:0046961 GO:0048471 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1813.1_11876.t1 | 1 | 1 | ATP-synt_ab_N | 38 | 104 | 1.1e-11 | 44.7 | 6.2e-15 | 2.3e-11 | 43.7 |
| pfu_aug2.0_1813.1_11876.t1 | 1 | 1 | ATP-synt_ab | 160 | 373 | 0.0 | 170.5 | 0.0 | 0.0 | 163.8 |
| pfu_aug2.0_1813.1_11876.t1 | 1 | 1 | ATP-synt_ab_C | 391 | 487 | 2.4e-17 | 63.4 | 1.6e-20 | 6.0e-17 | 62.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1813.1_11876.t1 | gi|676462660|ref|XP_009056341.1| | hypothetical protein LOTGIDRAFT_119755 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1813.1_11876.t1 | gi|524870028|ref|XP_005091800.1| | PREDICTED: V-type proton ATPase subunit B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1813.1_11876.t1 | gi|17136796|ref|NP_476908.1| | vacuolar H[+]-ATPase 55kD subunit, isoform B [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_1813.1_11876.t1 | gi|557762678|ref|XP_005181053.1| | PREDICTED: V-type proton ATPase subunit B [Musca domestica] | 0.0 |
| pfu_aug2.0_1813.1_11876.t1 | gi|195329486|ref|XP_002031442.1| | GM25995 [Drosophila sechellia] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1813.1_11876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1813.1_11876.t1 atgaacatgagctcactaaacggacctttaaatgatgttgctgcaaggaatactcataaaatggctatcacaagagatta tatatctcagccaagaattacatataaaacagtatcaggtgtaaatggtcctttagtgatattggacgatgtaaagtttc caaaatatgctgaaattgtacagttaacattagctgatgggagcgtgcggagtggtcaggttcttgaaatcagcggttct aaagctgttgtacaggtatttgagggtacatcaggtatcgatgctaagcacacactatgtgaattcacaggagatattct caggatgcctgtctcagaagacatgttgggtcgtgtcttcaacggttcaggaaaacccatcgacaaaggtccacctgtca tggcagaggacttcttagatattcaaggtcagcccatcaacccctggtctcgtatttaccccgaggagatgatccagacc ggtatatcggctatagacaccatgaacagtattgccagaggccaaaaaatccccatcttctctgcagctggtctgcctca taatgaaattgctgctcagatttgtcggcagggaggtctcgtcaagttacccggtaaaagtgtgttagacgaccacgagg ataactttgctatcgtgtttgctgctatgggtgtaaacatggaaattgccagatttttcaaacaagattttgaggaaaat ggctctatggagaatgtgtgtttattcttgaatttagccaacgatccaacaattgaaccgtaccagtgtgagaaacacgt actgaccattctaacagacatgagctcttatgccgacgctttgagagaggtatcagcggccagagaggaagtgccgggtc gacgtggtttccctggttacatgtacacagatttagctactatttacgagagagctggtcgtgtagagggacgtaatggt tctatcacacagattcctatccttaccatgcctaacgacgatatcacccatcctatccccgatttgacaggctacattac agagggtcagatctacgtagacaggcaacttcacaacagacagatttacccaccaatcaacgtgcttccatcattgtctc gattgatgaagtccgctataggagagggtatgacaagggaagaccactctgatgtgtcaaatcaattatatgcatgttac gccatcggtaaagacgtgcaggccatgaaggctgtggtgggagaggaagccctcacacctgacgatctactctatctaga attccttactaaatttgaaaagaatttcatatcacaaggtcattatgagaacagaacaattttcgagtctctagacatag gatggcagttactgcgtatcttccccaaacagatgttgaaacgtataccccaatccacgttagagaaatactacccgaga gatgcacacaaaaagacaacggcagcggcagcttcggcagccggcacaagtaaagactccgagcacagtacgcaattata g |
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Protein
| Protein ID | pfu_aug2.0_1813.1_11876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1813.1_11876.t1 MNMSSLNGPLNDVAARNTHKMAITRDYISQPRITYKTVSGVNGPLVILDDVKFPKYAEIVQLTLADGSVRSGQVLEISGS KAVVQVFEGTSGIDAKHTLCEFTGDILRMPVSEDMLGRVFNGSGKPIDKGPPVMAEDFLDIQGQPINPWSRIYPEEMIQT GISAIDTMNSIARGQKIPIFSAAGLPHNEIAAQICRQGGLVKLPGKSVLDDHEDNFAIVFAAMGVNMEIARFFKQDFEEN GSMENVCLFLNLANDPTIEPYQCEKHVLTILTDMSSYADALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNG SITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACY AIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGHYENRTIFESLDIGWQLLRIFPKQMLKRIPQSTLEKYYPR DAHKKTTAAAASAAGTSKDSEHSTQL |
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