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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1813.1_11879
Locus scaffold1813.1 : 128876 ... 131911 : +
To GenomeBrowser scaffold1813.1:128876..131911
Genes list of scaffold scaffold1813.1
Synonym pfu_aug1.0_1912.1_00883

Manual annotation
Annotation by Blast2GO
Annotation GO
pre-mrna-splicing factor slu7-like GO:0005488

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1813.1_11879.t1 gi|91077680|ref|XP_974637.1| PREDICTED: pre-mRNA-splicing factor Slu7 [Tribolium castaneum] 4.0e-11
pfu_aug2.0_1813.1_11879.t1 gi|571573921|ref|XP_006560746.1| PREDICTED: pre-mRNA-splicing factor Slu7 isoform X3 [Apis mellifera] 6.0e-11
pfu_aug2.0_1813.1_11879.t1 gi|383847959|ref|XP_003699620.1| PREDICTED: pre-mRNA-splicing factor SLU7 [Megachile rotundata] 6.0e-11
pfu_aug2.0_1813.1_11879.t1 gi|571573923|ref|XP_006560747.1| PREDICTED: pre-mRNA-splicing factor Slu7 isoform X4 [Apis mellifera] 6.0e-11
pfu_aug2.0_1813.1_11879.t1 gi|380024445|ref|XP_003696006.1| 6.0e-11

Transcript
Transcript IDpfu_aug2.0_1813.1_11879.t1
Definition-
>pfu_aug2.0_1813.1_11879.t1
atgtcgttcactctgaacttggcgccctctgtggtggccaagcaggccaagtccgaggagcaggatgaaccaaagaaaaa
gtctcgggaagactggcgtaaacagaaagaactggaggagatgagaaaagccggtacagctccagcaatgaccgatgagc
ttggaaa

Protein
Protein IDpfu_aug2.0_1813.1_11879.t1
Definition-
>pfu_aug2.0_1813.1_11879.t1
MSFTLNLAPSVVAKQAKSEEQDEPKKKSREDWRKQKELEEMRKAGTAPAMTDELG

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