Gene
| Gene Model ID | pfu_aug2.0_182.1_07116 |
|---|---|
| Locus | scaffold182.1 : 162555 ... 190569 : + |
| To GenomeBrowser | scaffold182.1:162555..190569 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07116.t1 | 1 | 1 | Reeler | 32 | 156 | 5.2e-16 | 59.1 | 8.8e-20 | 6.6e-16 | 58.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07116.t1 | gi|269785151|ref|NP_001161531.1| | F-spondin-like protein precursor [Saccoglossus kowalevskii] | 5.0e-09 |
| pfu_aug2.0_182.1_07116.t1 | gi|193671548|ref|XP_001952355.1| | PREDICTED: spondin-1 isoform X1 [Acyrthosiphon pisum] | 3.0e-08 |
| pfu_aug2.0_182.1_07116.t1 | gi|328700803|ref|XP_003241387.1| | PREDICTED: spondin-1 isoform X3 [Acyrthosiphon pisum] | 3.0e-08 |
| pfu_aug2.0_182.1_07116.t1 | gi|328700799|ref|XP_003241385.1| | PREDICTED: spondin-1 isoform X2 [Acyrthosiphon pisum] | 3.0e-08 |
| pfu_aug2.0_182.1_07116.t1 | gi|524867462|ref|XP_005090542.1| | PREDICTED: uncharacterized protein LOC101845743 [Aplysia californica] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07116.t1 atgtaccagaggatgttatatcatatttttgtttattttttcgttgtttttggattattacaaggcatctcaagttcaga tgatattactgtatgtgatcgaacaccgatacacaccacagccgatcaatatcccggtgataatggatttggaatcacta taaaggaattagatgaatcgaaaccaaagaaagagaaatatacaccaggatcgaaatataccgtggaaattcggaatcgt tatgctgacaagttcttgggatatatgatggtggcagttccggccgagtccaaatccgaagacgtcacagctggaacatt ccatctatcaaagaagagtagaggacagaagaacccgtcctgtaagcacacggtcattactcactactatctcattccaa agaaagaggtcggattccaatgggaggcacccggtcccgaatctaatatcacatgcgttgaattccgagagaaggaaata atttccaataaagaccacactagctactgtcatatctga |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07116.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07116.t1 MYQRMLYHIFVYFFVVFGLLQGISSSDDITVCDRTPIHTTADQYPGDNGFGITIKELDESKPKKEKYTPGSKYTVEIRNR YADKFLGYMMVAVPAESKSEDVTAGTFHLSKKSRGQKNPSCKHTVITHYYLIPKKEVGFQWEAPGPESNITCVEFREKEI ISNKDHTSYCHI |
|