Gene
| Gene Model ID | pfu_aug2.0_182.1_07122 |
|---|---|
| Locus | scaffold182.1 : 341694 ... 388876 : - |
| To GenomeBrowser | scaffold182.1:341694..388876 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_57139.1_20225 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc100163015 | GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07122.t1 | 1 | 1 | RhoGEF | 205 | 336 | 5.7e-20 | 71.9 | 6.6e-24 | 9.9e-20 | 71.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07122.t1 | gi|260789548|ref|XP_002589808.1| | hypothetical protein BRAFLDRAFT_90496 [Branchiostoma floridae] | 1.4013e-45 |
| pfu_aug2.0_182.1_07122.t1 | gi|676457292|ref|XP_009054602.1| | hypothetical protein LOTGIDRAFT_161117 [Lottia gigantea] | 4.0e-19 |
| pfu_aug2.0_182.1_07122.t1 | gi|156377778|ref|XP_001630823.1| | predicted protein [Nematostella vectensis] | 1.0e-15 |
| pfu_aug2.0_182.1_07122.t1 | gi|196005177|ref|XP_002112455.1| | predicted protein [Trichoplax adhaerens] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07122.t1 atgtttaacaaaagcagaatggaagagagacgaggatcacacgagaacctcgacttacatgagagttacgcaaaaatccg aagcatgtcacgccgaagatggtccgtggatcacacttctatgcaccatctaccgctttctctaaatttgacattgcggt caaaaaagcgttccttttttgcgggaaatagttcggaatctctcagccacggtcatttagagagtatagacgatgttagt gaaatggaacataatttctttccgaagggatttcgccagacccggagaagcagtcttcagaaactttttcatttttcgcc ctcgaaaaagaaacaccacgatccagcactggcattggtgttccacgaatctggaaaatcggttttgttaagtagtgaag atggctccgggttgagggaagtcctatctcaggccagtatggaacacaggatcagtagctaccgggtaatcatagacacc acccggtcgctccttaactccgactccagctcgggatccaccgttctagattctggccttgaggacgtgtttgacgagct gagtaaaccagacgactacgatctacccaaggtgcccgataatcgacgtgacattgtacaggaattactgaaaacagaaa aggagtactgtaaatcactacggggcatcctggatacatacgctgaacctctgagaaaattctcgtcgttgaccaatgag gaccatatgatattgtttgtgggcctggaaccaatcatctccttcagtcatatgctgaccactaagattgaggactgcct taaatcctgggatacacagtcaacccaaataggaagtctattcaacaataagaaactttggagtgtccacgaagaatatt gtagcggcttccccaaaactaaacagttcctagaacagaagctggcgtccgacgactctcttgtccagttctgtaacctc agaagaggtcaggctacgcaggacctccaaagtttgctacgtctaccgagagcaccggttgacaattctggtgaacaatt agccaatgaacagcaccaaacgccaattttgttgaggatatcggcaatgaagagtccaaaatga |
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Protein
| Protein ID | pfu_aug2.0_182.1_07122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07122.t1 MFNKSRMEERRGSHENLDLHESYAKIRSMSRRRWSVDHTSMHHLPLSLNLTLRSKKRSFFAGNSSESLSHGHLESIDDVS EMEHNFFPKGFRQTRRSSLQKLFHFSPSKKKHHDPALALVFHESGKSVLLSSEDGSGLREVLSQASMEHRISSYRVIIDT TRSLLNSDSSSGSTVLDSGLEDVFDELSKPDDYDLPKVPDNRRDIVQELLKTEKEYCKSLRGILDTYAEPLRKFSSLTNE DHMILFVGLEPIISFSHMLTTKIEDCLKSWDTQSTQIGSLFNNKKLWSVHEEYCSGFPKTKQFLEQKLASDDSLVQFCNL RRGQATQDLQSLLRLPRAPVDNSGEQLANEQHQTPILLRISAMKSPK |
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