Gene
| Gene Model ID | pfu_aug2.0_1825.1_18555 |
|---|---|
| Locus | scaffold1825.1 : 13322 ... 44305 : - |
| To GenomeBrowser | scaffold1825.1:13322..44305 |
| Genes list of scaffold | scaffold1825.1 |
| Synonym | pfu_aug1.0_192.1_22053 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1825.1_18555.t1 | 1 | 1 | GPS | 571 | 613 | 3.7e-14 | 52.5 | 3.1e-17 | 7.7e-14 | 51.5 |
| pfu_aug2.0_1825.1_18555.t1 | 1 | 1 | PLAT | 659 | 767 | 8.8e-17 | 61.5 | 1.1e-19 | 2.8e-16 | 59.9 |
| pfu_aug2.0_1825.1_18555.t1 | 2 | 1 | Ion_trans | 988 | 1046 | 5.5e-08 | 32.2 | 0.077 | 190.0 | 1.1 |
| pfu_aug2.0_1825.1_18555.t1 | 2 | 1 | PKD_channel | 1000 | 1057 | 0.0 | 319.2 | 0.25 | 620.0 | -1.5 |
| pfu_aug2.0_1825.1_18555.t1 | 2 | 2 | PKD_channel | 1161 | 1595 | 0.0 | 319.2 | 0.0 | 0.0 | 319.2 |
| pfu_aug2.0_1825.1_18555.t1 | 2 | 2 | Ion_trans | 1390 | 1588 | 5.5e-08 | 32.2 | 2.2e-11 | 5.5e-08 | 32.2 |
Transcript
| Transcript ID | pfu_aug2.0_1825.1_18555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1825.1_18555.t1 atgcatgtttcggctactaaaccctcgtcagtgatcctaagtctaaacaatgttaaagatccagaagacgagaatgtaga agattttctgagactggcgtcacatgacgaagacagtgctttgacaaagcttttctcttcaggaaaatcacaggaaggaa agcaaatgataatggcaataacttcacttataaatgtatcacctgttaagataggagtctctcgtgcatcacttattcaa gagcaactcaagattatatctggtgtgtcgactgaaactgacaataccatgattagcatagtaactacagaacaaggact aacaacacaaaaacttactgtcatggagacaacgatagaccctgtacagttagaggaagaaaagaaaaggaatgaacagg aaaaacaacagagaattaagttaagggaatctttgctggaaacattgtcagcaactaccgactccttgacattggattct ctacaacagacggcaaagtgcttcagcttggttacacaagaatcatcagaactttcagaaacttcgcaggaaattgcggt agatgcaatgtcaaagatggcaaattcatttcaaaatatagtagagtcatcccgaaatgatttgactttgcagcaattca gcactggagaagacatactggcaagcattgggagtgtaataacagcagctacagggtccacgtctttggagttgacattg ttaaacctacaagattcctcagatgaagatatatctaatgcccaaggttcggggatgccagaaacaacacagtcatacct tacagaaacaatcgactataactccacaactataagtccacaccagcagaaagaaaattcaaggaaaagggtaaaagaaa tagcacaaaaagctcttaatatagcggacgttgtttatcagactgtgattaagaacagagtaccaggtgagccacctgtg atactagaatctcctctactgaccatcatagcccagagaaatgaaccaacacaactcaacaatacaaagctggaagttaa tactggatcattcaaaatgcccgcaatggatatctttctgcaggaaagcacaaatatatcatatattgatacaaagatac ttagttccatatctaatccttatgtgtgggatgacagtgcaaaatttattggtacgccagtgctgactcttgatttatat aaaagcaacgaagagcgtgtgcaaattcaagacctagaaaccgacattgtaatcgacattacgactgttccatcagtagc aaagataactagaacgtcatttccaataatggataaaacatcattgtcttatcactccttcgatgttcgatctaacttct cttccgtccatattcttgttgaaccagaagatatgggaaggtctgtaaagtgttatgttaaatttgacagagttcccagc gagtctgactttgattttaatgtctccattccacgtgatgtatcaggtattcttgatcaaccagacgccgatttagagga ggaattacgttatactattttcctatcacctgaatttatacagcagtatggtccaggaacatactatcttggactgattc ctgagtccaatgacacttctgacgatgagtatgatgactatgacgattattactccgactacggaatagagacggcacca gatctgtttaattatactacacgatttatcacttccggttgttacttttggaaagaatcatcagaaacttgggtttcaga cggctgtaaggttagcccgctctcaaactccaactttaccagatgtttgtgtaatcacctgacatcatttggatcggact ttttcgttccaccaaacaagataaacttcttgactgtttttacaaacatggacgagaagatacgtgaaaactctgcagtt cttgccatgttgtcctcaccattgtcggacaatatcatcacggatacttactactaccaaatcacggtttgtaccggatt tcgccgagctgcaggtacgaagtccaatatcttcttcattttggctggaaatgacggggacacgggagttagacagctga ttgatgagaagggaataaagacatgcagtagaggaagtgtgaataactttgttatggggaccagggaatgtataggtcca ttgtcatacatgagggtgtggcacgacaatagcggaaagggcaagctacagggctggtacctcagcaaagtaatcattac tgacatacaaacaggagaagcgttctggtttctatgtaatcgctggttggcagtagaggaagacgatggtatggtcgaca ggctgttaccagttgctagtgatgatgatttggcaactttccataatttattcatatctaagacaaagaggaactttacg gattcacacctgtggatatctatatttgttcgtccataccgcagcactttcacaagagtacagagagtgtcttgtatctt gtcactggtcatgacgacaatgatggctaacgccatgttctttggtgccgaagataacgtacaaaacaaggaatccttca ttcttggaccctttgaatttaccttgcacggtctttatatcagttttgtgagtggactagtaattctgccggtaaacatt ctaattgattttgtatttagaaaaacaaaaccgaaggagaaccgaataacaaatgctttcagttcaaaaaatgtcaaacc gtccctgaatctttcacatgttcggctgaagctctggtcgccctctgacgacacaaaagttgttgatatgactgactatg aatttgaccacccaccgccgtattctttgacgaacaacgagtatcaaggatttgaaaaagttcgaccggactctgtagca tctacaagatttctccttaagaacagaaaagaaacttcaacacaaccgaaaagaaagaagaattgtggaaagtttatgct accacattgtttcatttacttaggatggagcttggtttttctatcaagcattatatctgctttcattactttcctctaca gcatacaatggggcaaaaagaaatcattggaatggcttttatcaatgattctgtccatctttgaatctgttgtagtcgta caacctttaaagattataattttggcaatgatcttatctctgatcctgaggaaaccagaagcggaagaggaaacgggatc ggatgacggttccgtgaatggaatacaacaagacgaagaacccattgaaattggtcataccaaagctgtgagaccgtgtt tgaaggttgacccaccagatcatgagaaattagctgttgtacgacaaaaacgtttgaaggaaatcaaaatgtatggcatt attagggagatcgtattctacttgtgtttcctggccattattatccttgtttcaagtcacaacagagatcccaaggcttt ccatactaaagaaacattagttaatttgctaggaataaacacccgcctagccaaggtgcgggatgttgatggcttctggt cgtatttgaaagactacttagttcatcaattatacacaacagaccattggaatggagaaccactgccagatagtcagcgg agattggtgtcatccatggtggcatatagagtgggaccattaagagttagacagcaaagagtaagaaaagactcttgcca agctattccattaatgcatgcatttgtcagtcaatgtagcagagagtggtctgtccgttttgaggacgataccaagtata gaaccggatggatgtctctaaggtccaatgagacagtagataatctaatgaactacccatggaaacataagtccttattc gacaatgccggtgtcccttatgttggtgaatttggtgtgtaccctggtggtggatatgttgttgatttgattggcaaaaa agacagagttgtcgaaacattagatgagttgttagaatttgaatggatcaacaagtactctagagtacttttcatagagt tcacagtatataatccccaggctaatatgttttcaacaatacttattgtatttgaaatgccaaccataggacagttacac atcaattactccattaaaacttttcggcttttctcatacctcggaggatatggcatattcgttattctaagtgagattgc agctttggcttgtgttgtttatttcatagtgagagaagtcaaaatcttcaaaaggacccgtaccacctatcttaagagtt tctggaacattgcagaactagtgaatttgttattagcgattacagctattgtcatgtacatactacgccacattctaaca cagcatgctgttaaaaaggtgacaaaattgagagataaattttacgatttccaaaaagtagcactctgggatgaaacgtt caactttatcctggcatttaccatattcatcgcaatcttaaagcttgtccatattttgcgttttaatcgaaaaatgtcaa tgatggccggaattttacgaaatgcagccaaagaactgtcggcatttgttattgtcttcgtccttttcatcttagcctat gcggcatggggctacataatgtttggtccaaaaatggcttcctatcgtagtatgattgacgcaatagagactttgctcaa cttttctcttggaagtttcgactatcttgctttggagaatgcaaacagaattttcggtcctatatttttctttgcattct tttttactataatgttcatccttttgaatatctttgttactattttgaatgaatcgatttctactgtaaaagatgatgtc tcaaagcaaaccaacgagtacgaacttgtcgccttcatatggcaaaagcttaaagactggtctggattagatttagatag aatcgtccaggacgtcaaacggaagtatgatatagaaggtatacaaagtcaggataataaaggttccaaagaaaacaaac aaaaacctccaccacacaaagaggagcgaactcccaatatgggagtgagaccaagtgtcccggaagaaaaatcagaaacc gaaggcatacaaaatcaggacaaaacaggaaccaaagcaaacaaacaaaaacctccaccatatgaaaagaagcgacgagg ctacgttaatgagttaaagaagatcctgacgataatctcaacagcattcacaatagagcgcaaaattaaacatcgacaga cccctagcaagctagaggtgggaccaggtgcccgggaggagtaa |
|
Protein
| Protein ID | pfu_aug2.0_1825.1_18555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1825.1_18555.t1 MHVSATKPSSVILSLNNVKDPEDENVEDFLRLASHDEDSALTKLFSSGKSQEGKQMIMAITSLINVSPVKIGVSRASLIQ EQLKIISGVSTETDNTMISIVTTEQGLTTQKLTVMETTIDPVQLEEEKKRNEQEKQQRIKLRESLLETLSATTDSLTLDS LQQTAKCFSLVTQESSELSETSQEIAVDAMSKMANSFQNIVESSRNDLTLQQFSTGEDILASIGSVITAATGSTSLELTL LNLQDSSDEDISNAQGSGMPETTQSYLTETIDYNSTTISPHQQKENSRKRVKEIAQKALNIADVVYQTVIKNRVPGEPPV ILESPLLTIIAQRNEPTQLNNTKLEVNTGSFKMPAMDIFLQESTNISYIDTKILSSISNPYVWDDSAKFIGTPVLTLDLY KSNEERVQIQDLETDIVIDITTVPSVAKITRTSFPIMDKTSLSYHSFDVRSNFSSVHILVEPEDMGRSVKCYVKFDRVPS ESDFDFNVSIPRDVSGILDQPDADLEEELRYTIFLSPEFIQQYGPGTYYLGLIPESNDTSDDEYDDYDDYYSDYGIETAP DLFNYTTRFITSGCYFWKESSETWVSDGCKVSPLSNSNFTRCLCNHLTSFGSDFFVPPNKINFLTVFTNMDEKIRENSAV LAMLSSPLSDNIITDTYYYQITVCTGFRRAAGTKSNIFFILAGNDGDTGVRQLIDEKGIKTCSRGSVNNFVMGTRECIGP LSYMRVWHDNSGKGKLQGWYLSKVIITDIQTGEAFWFLCNRWLAVEEDDGMVDRLLPVASDDDLATFHNLFISKTKRNFT DSHLWISIFVRPYRSTFTRVQRVSCILSLVMTTMMANAMFFGAEDNVQNKESFILGPFEFTLHGLYISFVSGLVILPVNI LIDFVFRKTKPKENRITNAFSSKNVKPSLNLSHVRLKLWSPSDDTKVVDMTDYEFDHPPPYSLTNNEYQGFEKVRPDSVA STRFLLKNRKETSTQPKRKKNCGKFMLPHCFIYLGWSLVFLSSIISAFITFLYSIQWGKKKSLEWLLSMILSIFESVVVV QPLKIIILAMILSLILRKPEAEEETGSDDGSVNGIQQDEEPIEIGHTKAVRPCLKVDPPDHEKLAVVRQKRLKEIKMYGI IREIVFYLCFLAIIILVSSHNRDPKAFHTKETLVNLLGINTRLAKVRDVDGFWSYLKDYLVHQLYTTDHWNGEPLPDSQR RLVSSMVAYRVGPLRVRQQRVRKDSCQAIPLMHAFVSQCSREWSVRFEDDTKYRTGWMSLRSNETVDNLMNYPWKHKSLF DNAGVPYVGEFGVYPGGGYVVDLIGKKDRVVETLDELLEFEWINKYSRVLFIEFTVYNPQANMFSTILIVFEMPTIGQLH INYSIKTFRLFSYLGGYGIFVILSEIAALACVVYFIVREVKIFKRTRTTYLKSFWNIAELVNLLLAITAIVMYILRHILT QHAVKKVTKLRDKFYDFQKVALWDETFNFILAFTIFIAILKLVHILRFNRKMSMMAGILRNAAKELSAFVIVFVLFILAY AAWGYIMFGPKMASYRSMIDAIETLLNFSLGSFDYLALENANRIFGPIFFFAFFFTIMFILLNIFVTILNESISTVKDDV SKQTNEYELVAFIWQKLKDWSGLDLDRIVQDVKRKYDIEGIQSQDNKGSKENKQKPPPHKEERTPNMGVRPSVPEEKSET EGIQNQDKTGTKANKQKPPPYEKKRRGYVNELKKILTIISTAFTIERKIKHRQTPSKLEVGPGAREE |
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