Gene
| Gene Model ID | pfu_aug2.0_1830.1_01859 |
|---|---|
| Locus | scaffold1830.1 : 100683 ... 110945 : - |
| To GenomeBrowser | scaffold1830.1:100683..110945 |
| Genes list of scaffold | scaffold1830.1 |
| Synonym | pfu_aug1.0_2402.1_66316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1830.1_01859.t1 | 1 | 1 | RVT_1 | 405 | 539 | 1.2e-07 | 31.3 | 5.1e-11 | 3.7e-07 | 29.7 |
| pfu_aug2.0_1830.1_01859.t1 | 1 | 1 | rve | 1060 | 1158 | 6.5e-06 | 26.2 | 3.1e-09 | 2.3e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1830.1_01859.t1 | gi|585674384|ref|XP_006818597.1| | PREDICTED: uncharacterized protein LOC100369872 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1830.1_01859.t1 | gi|585651919|ref|XP_006814825.1| | PREDICTED: uncharacterized protein LOC102807723 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1830.1_01859.t1 | gi|156385361|ref|XP_001633599.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1830.1_01859.t1 | gi|156382508|ref|XP_001632595.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_1830.1_01859.t1 | gi|676494663|ref|XP_009066634.1| | hypothetical protein LOTGIDRAFT_155879 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1830.1_01859.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1830.1_01859.t1 atggcgatgctgcgatgttacgatgactatgttacgatgctgggatgttacgatggcgaagttacgatgacacgatggcg aatatacgatgttacgatggcgaagatacgatgttcacatcgtaacatcaccatcgtgacatcgtatcatcgccatcgta acatcgtgtcattgccatcgtatcatcgccaacaccatatcgatgtgaaagtccaacatacaaagcaacatgccttgcat gccgacggttgcactcctcttgaaacactggatgagacccattttgatgttgtgcgtgacaatataacattgcatatcga ggctctagttgtaaaggatctggacgtcgacatactagccggcataccttttatgtcagaaaatgacatcagcatccgtc ccgcaaaacacattatcatggtaggagataaccatgtcatcaaatataaccacagtcagtgctctctagtaaatcacata cgtagagcccaagggcatatactaagggccccgtctgtaactatatggccaggtgatcatattgacattgctctacctga acacataccgtcagagggtacagttgccatggaacctcgtatcgaacgcaccaacttaacatgcatctggccgaaaccag aaattgtcgatgttatagccggaaaagtccgagttatgaacaaaaccgatgaccctaaacttctgaagaaaaatgaacaa ttttgtcaagtacttccaacagtgctttgtgacaataccaatagctctgaacatcatacagatacacactccccacagaa ttcagcacgcagcgaaccgagcgcaacgggataccactcggatctagtgaatgtagaccctgatcatatactaagcactg atcaacttgagctattccgcaaatctctccgtgaccatgatagcgtttttgaacctacgtataaggggtataatggtacc gtcggcaacttcgaagcatcaattaacatgggtcctacacagccaccccaacgcaagggtaggctaccgcaatattctca tgagaaactccttatcctacaacaaaaatgtgatgatctgaaatcattgggagttctatgcaaaccagaagagctctcac taacagtagagtacctaaatccctcgtttctagtagctagggcaaaagggggtcataggcttgtaactgcctttgaggat gtaggacggtactcgaagccacaaccctctctaatgcccgatacagactcgatactacgtaaagtaggacaatggaaata tctcatagtcgcagatcttacgagtgcgtttctccaaattcctctgtcccggcaatcgttgaaatattgcggtattgtta cccaatataaaggtaaaagagtctacacaagatgtgcaatgggcatgccgggctcagaaacagctcttgaggagctcatg agtcgtgtcttaggggatcacatacaggctggatatttggctaaattggcagatgatctttattgcgggggtaacagtcc agaggaactacataaaaactggaccaaagtaatggagtctcttgacacatgcaatctccgaatttcgccttcaaaaaccg taatctgcccaaagtctaccacaatactaagctggatttggaccaaaggcagactctctgctagcccacacaagatttct gtactcgcaaccagtaagcaacccgacactgtcaatggccttagattttttattggtgcatacaaggtacttgcacgtgt gttaccgagttgttctcatgctctgattcctttggaaaatgctatagccggattacagtctacggacaaagtagtatgga gcgatgctctctcagagcactttaacttcgcgcaaaggaagttgcaagaaacaaaagatatcgtgctcccgcgacgcagc gacaaactatggattgtgacagatggttctgtaagcaaatgcggcattggcgccacactttatgtaatgcgagacaacaa gatatatttggcaggcttctttagtgcaaagttgagaaagcaccaagttacttggctgccgtgtgagatagaggcattgt gcatagccgcctctgtcaaacatttctgtgcatatataacccagtccactcaaaaaacgactgtacttactgatagtaag ccttgcgtccaggctatcgaaaagctccgtcgtggtgagttctcagcaagcccacgtgtaacatcatttctatctacagc aagcagataccaggtcaacttgctacatcttgctggatctgcaaatgttccatccgactttgcgagtagaaatgctgcgg attgttataacccatcttgccaagtctgtaacttcattgttcaaatggaggattctgtagtccgctccgctagccaatat caatctcaacatgaagcgcagaacttaccgtttactacacgctcggcatggtacaacattcagtcagagtgtcctgatct ccgaagggtccatgctcaccttaaacagggaacacgtctgtctaggaagcttacaaacattcgcgacataaaacgatacc ttaatgtagcaaaaattgctaaagacgggctattagttgctcatcgacaagaccctctaggaccattaaatgagctcatc atagttccgcgtaatgtgctggagggattactcactgcgattcatattcgaatggatcaccctaccaagcatcaaatgct cttgcttgtcaaacgcaagttttatgccctcgatctgtcacaaacaatagaccgtgtttgtgactcatgtcatacctgcg cttccctccagaaggttcccacatcatacaatgagcagtcatcagatctaccacccgagcttgtgggagtaaacttcgcc gctgatgtgatccaacagaaccgaccattaaatgagctcatcatagttcctcgtaatgtgctggatggattactcactgc gattcaaattcgaatggatcaccctaccaagcatcaaatgctcttgcttgtcaaacgcaagttttatgccctcgatctgt cacaagcaatagaccgtgtttgtgactcatgtcatacctgcgcttccctccagaaggttcccacatcatacattgagcag tcatcagatctaccacccgaggttgtgggagtaaatttcgccgctgatgtgatcaaacagaaccgtcagttgatcttcgt acttcgcgaaactgttatatcatttactgctgcatgcataatttccgatgaaaagagccaaacattaagggatgcgttat tgcgcctttgcatggaacttcatccgttggacggctctcatgccgtcgtacgagtcgaccctgcgccagggttcatagca ttgcgtgaagatgaccttctaaaataccaccgtatcaacctagaaattggtcgtgtcaaaaatccgaacaaaaacccaat cgctgagaaggctatatcagaattggaagacgaactagttagacaggagccttgcggaggcgacctagtttatctttatt ccgacaaagaaaagacaaaggctcgtccacgatatattgttgtcaacacaaatgatgattggtgctacataaagaaattt attgggaatcaactacgctctagttcctacaagattaaacaaagtgagtgctaccgtgtaccgtgcgagtcttctcctaa aagaagactgcaaataacaagcgattccgacgccgccgaggatttatacgaacaaaattgtgaaagcgctcagccgcaca acataccaaacaccgacgttcgccaagaactaccgatagagcctgaccaagctctcgctgccgtaccggaaattctcgcc atgccgctcactccgccacaagaatcatcagcttccgtcaatactcccgactcagattccgaagtcgaaagtgatcatgc ctatacgcgccctcaaaggacaaagaaacttccgtcgcacctaaaggaatatgtgttgtattag |
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Protein
| Protein ID | pfu_aug2.0_1830.1_01859.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1830.1_01859.t1 MAMLRCYDDYVTMLGCYDGEVTMTRWRIYDVTMAKIRCSHRNITIVTSYHRHRNIVSLPSYHRQHHIDVKVQHTKQHALH ADGCTPLETLDETHFDVVRDNITLHIEALVVKDLDVDILAGIPFMSENDISIRPAKHIIMVGDNHVIKYNHSQCSLVNHI RRAQGHILRAPSVTIWPGDHIDIALPEHIPSEGTVAMEPRIERTNLTCIWPKPEIVDVIAGKVRVMNKTDDPKLLKKNEQ FCQVLPTVLCDNTNSSEHHTDTHSPQNSARSEPSATGYHSDLVNVDPDHILSTDQLELFRKSLRDHDSVFEPTYKGYNGT VGNFEASINMGPTQPPQRKGRLPQYSHEKLLILQQKCDDLKSLGVLCKPEELSLTVEYLNPSFLVARAKGGHRLVTAFED VGRYSKPQPSLMPDTDSILRKVGQWKYLIVADLTSAFLQIPLSRQSLKYCGIVTQYKGKRVYTRCAMGMPGSETALEELM SRVLGDHIQAGYLAKLADDLYCGGNSPEELHKNWTKVMESLDTCNLRISPSKTVICPKSTTILSWIWTKGRLSASPHKIS VLATSKQPDTVNGLRFFIGAYKVLARVLPSCSHALIPLENAIAGLQSTDKVVWSDALSEHFNFAQRKLQETKDIVLPRRS DKLWIVTDGSVSKCGIGATLYVMRDNKIYLAGFFSAKLRKHQVTWLPCEIEALCIAASVKHFCAYITQSTQKTTVLTDSK PCVQAIEKLRRGEFSASPRVTSFLSTASRYQVNLLHLAGSANVPSDFASRNAADCYNPSCQVCNFIVQMEDSVVRSASQY QSQHEAQNLPFTTRSAWYNIQSECPDLRRVHAHLKQGTRLSRKLTNIRDIKRYLNVAKIAKDGLLVAHRQDPLGPLNELI IVPRNVLEGLLTAIHIRMDHPTKHQMLLLVKRKFYALDLSQTIDRVCDSCHTCASLQKVPTSYNEQSSDLPPELVGVNFA ADVIQQNRPLNELIIVPRNVLDGLLTAIQIRMDHPTKHQMLLLVKRKFYALDLSQAIDRVCDSCHTCASLQKVPTSYIEQ SSDLPPEVVGVNFAADVIKQNRQLIFVLRETVISFTAACIISDEKSQTLRDALLRLCMELHPLDGSHAVVRVDPAPGFIA LREDDLLKYHRINLEIGRVKNPNKNPIAEKAISELEDELVRQEPCGGDLVYLYSDKEKTKARPRYIVVNTNDDWCYIKKF IGNQLRSSSYKIKQSECYRVPCESSPKRRLQITSDSDAAEDLYEQNCESAQPHNIPNTDVRQELPIEPDQALAAVPEILA MPLTPPQESSASVNTPDSDSEVESDHAYTRPQRTKKLPSHLKEYVLY |
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