Gene
| Gene Model ID | pfu_aug2.0_1832.1_08603 |
|---|---|
| Locus | scaffold1832.1 : 102332 ... 119265 : - |
| To GenomeBrowser | scaffold1832.1:102332..119265 |
| Genes list of scaffold | scaffold1832.1 |
| Synonym | pfu_aug1.0_8929.1_53257 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1832.1_08603.t1 | 2 | 1 | OTU | 97 | 136 | 7.4e-12 | 45.9 | 0.12 | 1800.0 | -0.6 |
| pfu_aug2.0_1832.1_08603.t1 | 2 | 2 | OTU | 304 | 404 | 7.4e-12 | 45.9 | 3.4e-15 | 5.0e-11 | 43.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1832.1_08603.t1 | gi|472354081|ref|XP_004396703.1| | PREDICTED: OTU domain-containing protein 6A [Odobenus rosmarus divergens] | 4.0e-08 |
| pfu_aug2.0_1832.1_08603.t1 | gi|471391303|ref|XP_004380230.1| | PREDICTED: OTU domain-containing protein 6A [Trichechus manatus latirostris] | 2.0e-07 |
| pfu_aug2.0_1832.1_08603.t1 | gi|335306142|ref|XP_003135205.2| | PREDICTED: OTU domain-containing protein 6A [Sus scrofa] | 3.0e-07 |
| pfu_aug2.0_1832.1_08603.t1 | gi|731233626|ref|XP_010630473.1| | PREDICTED: OTU domain-containing protein 6A [Fukomys damarensis] | 3.0e-07 |
| pfu_aug2.0_1832.1_08603.t1 | gi|586476123|ref|XP_006868615.1| | PREDICTED: OTU domain-containing protein 6A [Chrysochloris asiatica] | 8.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1832.1_08603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1832.1_08603.t1 atgagattttgcctgttgtattccatggagtatgagattttgcgggtaattgcaacaaccagcaaatgtgtgtatcgttg tggaaaagatccacctgaagtggaagagccgtatccaatgcctccgattttctcctcacgttccacattaacctacagga ctcccggtagcacgcccgcaaactctccttacgtcacccctagtcagaccccaaaatcacaaagggctaaatttccatat atggaaaatgggagtacacaatacctacaagttccagatgcactgaagaggtcaacttctgttcgacacaataggagtga tattccatcattcccacactctggaatgagacgtttgagcaagagcgagtcatctttagaaatccctgcaatggcgcaat tacttatgttgaagaaatcaagtcgctccacagagagaatagctaagtgcaggacaccaaaattgaaacaagagagtccc ctagccagagatgtagataacaagggtaacctgccagagacttgctccacacattctctcatcccaggtgttgtgcaaca gcctgacctacctggttcatcaaagaattcaccctatgtaataaagaaacaattagtgtatattttccaaaatgtcaata atgctatcgtgggggatcgtgcaaaaatggtgatcaacaaattcagcaaaagcacagatcactctgatgaggaggagagt gatgaggaaaatggagaagaaaatgaagaaagtgaacttctatgtaaagcaagggaaaacgaagaaaatggagctagtct agagtcttctgataaaaagactgctcttgccactcttacaaccattgaggatgctatgaacagtctttctgatcaagttt ccggcaaatacactgtagaagatgtgcaacatgacgggcattgtgtttatcattgcgtaaagaaagccaccggctgtaaa ctaagtatcgaggaaatgaggaactgggtagctaactacatggaggcgcattgcaattctttcaaagaatgcctgtcgac acaaagaaaacatcattcagatgatatcgacactatatgggctgactatttatacggtgtaaggaataatgaatggggtg actacctcgttttagttgccctggctaatatttgcgatattaaaatcaatgtcatttctacaagaacaccaaatgacgtg ttagcaattaagccgagctcgaatccaaggtactctattcatttaggtcatttgacagatttgtctacagacagagattt acattttgtgattttacgcaaacaagattcagaatag |
|
Protein
| Protein ID | pfu_aug2.0_1832.1_08603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1832.1_08603.t1 MRFCLLYSMEYEILRVIATTSKCVYRCGKDPPEVEEPYPMPPIFSSRSTLTYRTPGSTPANSPYVTPSQTPKSQRAKFPY MENGSTQYLQVPDALKRSTSVRHNRSDIPSFPHSGMRRLSKSESSLEIPAMAQLLMLKKSSRSTERIAKCRTPKLKQESP LARDVDNKGNLPETCSTHSLIPGVVQQPDLPGSSKNSPYVIKKQLVYIFQNVNNAIVGDRAKMVINKFSKSTDHSDEEES DEENGEENEESELLCKARENEENGASLESSDKKTALATLTTIEDAMNSLSDQVSGKYTVEDVQHDGHCVYHCVKKATGCK LSIEEMRNWVANYMEAHCNSFKECLSTQRKHHSDDIDTIWADYLYGVRNNEWGDYLVLVALANICDIKINVISTRTPNDV LAIKPSSNPRYSIHLGHLTDLSTDRDLHFVILRKQDSE |
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