Gene
| Gene Model ID | pfu_aug2.0_1835.1_18560 |
|---|---|
| Locus | scaffold1835.1 : 14780 ... 41455 : - |
| To GenomeBrowser | scaffold1835.1:14780..41455 |
| Genes list of scaffold | scaffold1835.1 |
| Synonym | pfu_aug1.0_5921.1_31075 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1835.1_18560.t1 | 3 | 1 | SEFIR | 144 | 242 | 0.0 | 177.8 | 6.0e-22 | 2.2e-18 | 66.7 |
| pfu_aug2.0_1835.1_18560.t1 | 3 | 2 | SEFIR | 266 | 341 | 0.0 | 177.8 | 1.2e-20 | 4.4e-17 | 62.5 |
| pfu_aug2.0_1835.1_18560.t1 | 3 | 3 | SEFIR | 342 | 453 | 0.0 | 177.8 | 5.4e-16 | 2.0e-12 | 47.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1835.1_18560.t1 | gi|676491687|ref|XP_009065676.1| | hypothetical protein LOTGIDRAFT_169123 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1835.1_18560.t1 | gi|524912113|ref|XP_005110910.1| | PREDICTED: uncharacterized protein LOC101852736 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1835.1_18560.t1 | gi|541952217|ref|XP_005432647.1| | PREDICTED: interleukin-17 receptor D [Falco cherrug] | 2.0e-23 |
| pfu_aug2.0_1835.1_18560.t1 | gi|700352129|ref|XP_009920258.1| | PREDICTED: interleukin-17 receptor D, partial [Haliaeetus albicilla] | 2.0e-23 |
| pfu_aug2.0_1835.1_18560.t1 | gi|729722548|ref|XP_010570865.1| | PREDICTED: interleukin-17 receptor D [Haliaeetus leucocephalus] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1835.1_18560.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1835.1_18560.t1 atgataagtgtatgttcccggaacattgcgtcgcgatatcaagcgtctacattaaaacttcttaatatacctaacgccgt cttgtccttaattggagccaatctggaaatagatgagcagaaccatgctggatatgacagatgttattatgtgattggaa tgggtgatacagatcctgatagtgggaccatgtcatcaccgacaccgatcaaacctgataacgtagatgtcaaaacggct ggagatgccgtagtgaggaagcagtcgacaagtagcgagtatgagcagtcgttacagatcgtcctgggcacagtatgtgg tgtgtttggtttactaggactccttctcatactctcactgctctataggttgtacaaaaagagacaggctcggctcaggg cttcagacttggagcacaagcagacctctactgtcttgttactgtacgcttatgactgtgcggctcatgagaaagtagta tcatcgtttgccggttatctgatagagacatgtaattgtaacgtccatgtggatttatttgaggaccagatcatcacaga gagaggtttagatgactggctcgttgataggctacaggaagccgattttatattagtgctgtgttcaataggtgctagac tacgatgtacaaagaaacgggtacgatttaagttagatccgtatcgaagaattccagattattttgctgttgctgttgat tatgtcgcagagaaaatgagagttgaaaggcagaatttaaattctattgtagacttggagcacaagcagacccctactgt cttgttactgtacgcttatgactgtgcggctcatgagaaagtggtatcatcatttgccggttatcttatagagacatgta attgtaacgtccatgtggatttatttgaggaccagatcatcacagagcgaggtttagatgactggcttgttgataggcta caggaagccgattttatattagtgctgtgttcaataggtgctagactacgatgtacaaagaaacggatcatcacagagag aggtttagatgactggctcgttgataggctacaggaagccgattttatattagtgctgtgttcaataggtgctagactac gatgtacaaagaaacgggtacgatttaagttagatccgtatcgaagaattccagattattttgctgttgctgttgattat gtcgcagagaaaatgagagttgaaaggtcaaaaggcttgccaatgtcaagatttataaatgtctactttgattattctac ggccagtgacattccccatcagcttgagatgggatctaagttctgcatgatgaaagacatatcaaaactgttctgtcata tccatggctttatgtctgatagttccaaatgtgtcactacatatcctgctctctctgacaattattttgagagttctgaa ctcggcttagaacttaaagtggctgttgattcggcaaaggaatattatcgctgtaatcctaactgggtggaagacagcat ggaacttttacctccaccgacaaaatcaaagtcacatcttaccagaaaaagctctctggagcctctacttccacaggatg aagctccgaaggacattatagagagaactcgagagtatctggatactactgtagatgtccatcgtcaaagtctgccaccg taccctgacaatctgaaacattcgtcgccaacattacaaagtcgtcaaaattctctcccctcgtctctcagtagcaagga attatcaactccttccccacctgctcatacctctaaaagctacgaaaacttcaaaggaacaaatcgatactctgctgata tagagacattgaaatgtatggtatgtggattgaaggagcatcagcacgatcatggcctgtgtagtaacaggctcaaacct caccagagctatgttcacactacagaggacgaggatttaacgtcagcaagactgaaaagtaagtccatgccgactgtttg caatccacgattacagagttcacaaactgtgctacgagctgatgttcataaagaatgggaagatcatgagaatcgattcc cgatttgtcagcggcagggctcgttctccgactcacaagaatcaagttcctgtaaggacgttactttggacgatttggag agggacgttcagtctatcattatgccaaaacatcgtaccaacatggaaaaacagccaaaatttgagatgaaatcagacaa aggaggggatctccaacaacaccaggctgcagcacctacagcaaaaccccaaaatcctcatgcaaaaataacagagcaga caagcactggaagagatgcaaaagggacaaggaacgtcaacgcacaacacagaaacatcaaacacaaaggactacacata aaccaacgagaccaatgggtaaccggtgccgacttaggacggtcatctgccacggaaacgtggataacgtgcgcacaacc ctcacacattttcgattacccagaggtctcgaagaacgtacaattgtggtgtaaaacaacctcctcactgtcagatgacc acacacaaacaagaccgcaaaacgcaggggcccaagcaacatag |
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Protein
| Protein ID | pfu_aug2.0_1835.1_18560.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1835.1_18560.t1 MISVCSRNIASRYQASTLKLLNIPNAVLSLIGANLEIDEQNHAGYDRCYYVIGMGDTDPDSGTMSSPTPIKPDNVDVKTA GDAVVRKQSTSSEYEQSLQIVLGTVCGVFGLLGLLLILSLLYRLYKKRQARLRASDLEHKQTSTVLLLYAYDCAAHEKVV SSFAGYLIETCNCNVHVDLFEDQIITERGLDDWLVDRLQEADFILVLCSIGARLRCTKKRVRFKLDPYRRIPDYFAVAVD YVAEKMRVERQNLNSIVDLEHKQTPTVLLLYAYDCAAHEKVVSSFAGYLIETCNCNVHVDLFEDQIITERGLDDWLVDRL QEADFILVLCSIGARLRCTKKRIITERGLDDWLVDRLQEADFILVLCSIGARLRCTKKRVRFKLDPYRRIPDYFAVAVDY VAEKMRVERSKGLPMSRFINVYFDYSTASDIPHQLEMGSKFCMMKDISKLFCHIHGFMSDSSKCVTTYPALSDNYFESSE LGLELKVAVDSAKEYYRCNPNWVEDSMELLPPPTKSKSHLTRKSSLEPLLPQDEAPKDIIERTREYLDTTVDVHRQSLPP YPDNLKHSSPTLQSRQNSLPSSLSSKELSTPSPPAHTSKSYENFKGTNRYSADIETLKCMVCGLKEHQHDHGLCSNRLKP HQSYVHTTEDEDLTSARLKSKSMPTVCNPRLQSSQTVLRADVHKEWEDHENRFPICQRQGSFSDSQESSSCKDVTLDDLE RDVQSIIMPKHRTNMEKQPKFEMKSDKGGDLQQHQAAAPTAKPQNPHAKITEQTSTGRDAKGTRNVNAQHRNIKHKGLHI NQRDQWVTGADLGRSSATETWITCAQPSHIFDYPEVSKNVQLWCKTTSSLSDDHTQTRPQNAGAQAT |
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