Gene
| Gene Model ID | pfu_aug2.0_184.1_13752 |
|---|---|
| Locus | scaffold184.1 : 253136 ... 260731 : + |
| To GenomeBrowser | scaffold184.1:253136..260731 |
| Genes list of scaffold | scaffold184.1 |
| Synonym | pfu_aug1.0_98970.1_28082 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-terminal ef-hand calcium-binding protein 3 isoform x2 | GO:0000137 GO:0005515 GO:0005789 GO:0042984 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_184.1_13752.t1 | 2 | 1 | EF-hand_8 | 42 | 58 | 5.2e-07 | 29.1 | 9.7e-06 | 0.024 | 14.2 |
| pfu_aug2.0_184.1_13752.t1 | 2 | 2 | EF-hand_8 | 62 | 91 | 5.2e-07 | 29.1 | 1.6e-05 | 0.039 | 13.5 |
| pfu_aug2.0_184.1_13752.t1 | 1 | 1 | ABM | 247 | 319 | 9.1e-06 | 25.6 | 7.5e-09 | 1.9e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_184.1_13752.t1 | gi|156355127|ref|XP_001623525.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_184.1_13752.t1 | gi|426391416|ref|XP_004062070.1| | PREDICTED: N-terminal EF-hand calcium-binding protein 3 [Gorilla gorilla gorilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_184.1_13752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13752.t1 atgaaaaaaaaagaagctcctcagtttccattgagatcaccaaagggatatagtaacaccactgtgctagtggtttgtga ggtagatagtgttacgacttctaagccaacatcatcagaacccacggtcaatgatggagctatttcctgggaggagtttg tgtcctttttctctgatggcgtcatgggaaaaagtgaacttcaggatttgtttaatgagattgatactcataacaccaac aacattgacacaggagagctttgtgagtatttttccaagcatctcggtccgatgaaggaggtttatgcattggtggagga actacaacagaaggtcacaaatgttctcttttctacctcagagtcataccctaaattgtcacggtcagatcagtttttcc agcgttttttgatgagagaagttataaaccagatatcggctttacagacacctctggaaacggcctcagatcatctggat gaacaagccaggaaagaaaggtcggatatagctcccatcgagtccaaggatgtggttaagcaaccagacgtagtgccggg cagaataggtcgccgagcacgcagacaaatcagcaaccaatcacaggccagtgacgcacctgctgcccttacatctcagg ttgacagactagctacattactggatcgcttggaacacggagtgaatttcaaaggatttgttgatgaagatttgaatgca acagaaaatgaccagaatgttttagtacaaagagaaatgaagatactacaggaaaagaaggaggaatttaacaaagtgat tagacagtacatagaggacactaacaatgctgagggagctatgaatgtcagcattagatacttcaaggactcgggatatt tcactctgtatgaagtatggcagactgagaaacaatatgaagattatgaagccagtggggagtttaaagctcaattcaag gatctcctggaagaagaagaatgtcctcgttctgttaccttcccagtgtcagcattagatacttcaaggactctggatat ttcactctgtatgaagtatggcagactgagaaacaatttgaagattatgaagccagtgggaagtttaaagctcaattcaa ggatctcctggaagaagaagaatgtcctcgttctgttaccttcccagctgcatggtggaagaaagatttctgataataga aacagagcatatgatggacagctcacatttcataattatgaacaatattacctctttgtatga |
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Protein
| Protein ID | pfu_aug2.0_184.1_13752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13752.t1 MKKKEAPQFPLRSPKGYSNTTVLVVCEVDSVTTSKPTSSEPTVNDGAISWEEFVSFFSDGVMGKSELQDLFNEIDTHNTN NIDTGELCEYFSKHLGPMKEVYALVEELQQKVTNVLFSTSESYPKLSRSDQFFQRFLMREVINQISALQTPLETASDHLD EQARKERSDIAPIESKDVVKQPDVVPGRIGRRARRQISNQSQASDAPAALTSQVDRLATLLDRLEHGVNFKGFVDEDLNA TENDQNVLVQREMKILQEKKEEFNKVIRQYIEDTNNAEGAMNVSIRYFKDSGYFTLYEVWQTEKQYEDYEASGEFKAQFK DLLEEEECPRSVTFPVSALDTSRTLDISLCMKYGRLRNNLKIMKPVGSLKLNSRISWKKKNVLVLLPSQLHGGRKISDNR NRAYDGQLTFHNYEQYYLFV |
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