Gene
| Gene Model ID | pfu_aug2.0_184.1_13754 |
|---|---|
| Locus | scaffold184.1 : 292897 ... 304905 : - |
| To GenomeBrowser | scaffold184.1:292897..304905 |
| Genes list of scaffold | scaffold184.1 |
| Synonym | pfu_aug1.0_15978.1_25476 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphoenolpyruvate carboxykinase | GO:0004613 GO:0005525 GO:0005739 GO:0006094 GO:0016301 GO:0016310 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_184.1_13754.t1 | 1 | 1 | PEPCK | 68 | 662 | 0.0 | 921.8 | 0.0 | 0.0 | 921.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_184.1_13754.t1 | gi|524894602|ref|XP_005103797.1| | PREDICTED: phosphoenolpyruvate carboxykinase [GTP], mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_184.1_13754.t1 | gi|676445995|ref|XP_009050934.1| | hypothetical protein LOTGIDRAFT_178121 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_184.1_13754.t1 | gi|637370866|ref|XP_003229687.2| | PREDICTED: phosphoenolpyruvate carboxykinase [GTP], mitochondrial [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_184.1_13754.t1 | gi|27695247|gb|AAH44042.1| | PCK2 protein, partial [Xenopus laevis] | 0.0 |
| pfu_aug2.0_184.1_13754.t1 | gi|127799042|gb|AAH63224.2| | phosphoenolpyruvate carboxykinase 1, cytosolic [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_184.1_13754.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13754.t1 atgggttctcttgaaatcattagacgtaattctgcaagcatgcctgcacaagaaatgagagaagaaacatgctgtcccaa atttgcgacacgcattctcaaagaagctgtcaaggcaggaacaagtcagagtcatgggtacgtaacgcagaaaaacctac tgtatggacactggaacaaactacctaagaaagtccagagctacgtggaagaaaacataaaaatctgtaaaccgtccacc gtgcatatctgtgatgggtcggacagggaaaatgagttactgatgtacattctgcagcgtgatggaatgattaaaccatt accaaaattagaaaattgttggttggctaaaacagatccagcagatgtggcccgtgtggagagtaaaactttcatttcca cagaggaagaacgggatacgataccgattcctaaaagtggagtgaagggaactctgggtaaatggatgtcgccggaggat ctggacacagagctaaatatgaggttcccaggatgtatggaaggaaggaccatgtacgtcatcccattcagtatgggtcc ggtaggatctcctctgtctaagatcggcattcagttaacggactccgcctacgtcgtcgccagcatgcgcgtcatgacca ggatggggtcaaaggtcctcagtacccttggcaacaatgaattcatcaaatgtctacactctgtaggaagacctctacct ttacaagagaaattaaacaacaattggccgtgtaaccccaagcagacaatcatagctcacctaccggccaaaaacgagat ctgttcatacgggagcgggtatggaggtaactcactgctcggcaagaaatgcttcgccctgcgactggggtctattctgg gccatagagagggatggctggctgaacacatgctgattttaggattggagaatgacaagggagagaagaagtacatggca gcagcgtttccgagtgcgtgtggtaaaaccaacctagcgatgatgacccctacattaccaggttacaaggtcacgtgtgt cggggacgacatcgcttggatgagatttgacaaagatggtcggttaagagccattaatccagaagccggattctttggtg ttgctccaggtacctcaatgaagaccaaccccaatgccatgaaaacgatcaccaggaatacagtgttcactaatgtagct gagacttccaatggcagtgtattctgggaaggtttagaggaggaagtcccgcgcacctctcagatcacctcatggctcgg tgtgccggagtggacacaagatagcgggaaacctgcagctcacccaaactcaagattctgcacgccagctaagcagtgcc caattatggatcctgactgggaaagtccagagggtgttccgatagatgccatcatttttgggggtcgcagacctgaaggt gtaccgttagtctatgaggcatacaactggaatcatggagtatttataggagcgtcgatgaggtcagaggccacggcggc cgctgaacataaaggaaaggttgttatgcacgacccttttgccatgagaccattcttcggctacaactttggacactatc tcaaacactggttaagcttccaggagcaatcaaacctgaaacttccgaaaatctatcatgtcaattggtttagaaaagac gatcagggcaaattcatctggcctggattcggtgaaaattcacgagtgttggactggattttccgtcgtgtaaacggtga agactgtgccgtccaatcagccgtaggtaatattccgactccaaactcgttaaatatggaaggaataaaccaaaatgtag atatggaggcgctattcgctttacctaaagacttctggcaaagagaagtgaaagaagtatcaaaatactttgacgagcag gttaatgaagatcttccgccagaaattatgcaagaattgcggaaattagaaacaagggtcaacaccatgttatag |
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Protein
| Protein ID | pfu_aug2.0_184.1_13754.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13754.t1 MGSLEIIRRNSASMPAQEMREETCCPKFATRILKEAVKAGTSQSHGYVTQKNLLYGHWNKLPKKVQSYVEENIKICKPST VHICDGSDRENELLMYILQRDGMIKPLPKLENCWLAKTDPADVARVESKTFISTEEERDTIPIPKSGVKGTLGKWMSPED LDTELNMRFPGCMEGRTMYVIPFSMGPVGSPLSKIGIQLTDSAYVVASMRVMTRMGSKVLSTLGNNEFIKCLHSVGRPLP LQEKLNNNWPCNPKQTIIAHLPAKNEICSYGSGYGGNSLLGKKCFALRLGSILGHREGWLAEHMLILGLENDKGEKKYMA AAFPSACGKTNLAMMTPTLPGYKVTCVGDDIAWMRFDKDGRLRAINPEAGFFGVAPGTSMKTNPNAMKTITRNTVFTNVA ETSNGSVFWEGLEEEVPRTSQITSWLGVPEWTQDSGKPAAHPNSRFCTPAKQCPIMDPDWESPEGVPIDAIIFGGRRPEG VPLVYEAYNWNHGVFIGASMRSEATAAAEHKGKVVMHDPFAMRPFFGYNFGHYLKHWLSFQEQSNLKLPKIYHVNWFRKD DQGKFIWPGFGENSRVLDWIFRRVNGEDCAVQSAVGNIPTPNSLNMEGINQNVDMEALFALPKDFWQREVKEVSKYFDEQ VNEDLPPEIMQELRKLETRVNTML |
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