Gene
| Gene Model ID | pfu_aug2.0_184.1_13755 |
|---|---|
| Locus | scaffold184.1 : 315876 ... 323329 : + |
| To GenomeBrowser | scaffold184.1:315876..323329 |
| Genes list of scaffold | scaffold184.1 |
| Synonym | pfu_aug1.0_1019.1_36785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_184.1_13755.t1 | 7 | 1 | Cadherin_2 | 23 | 108 | 1.7e-13 | 49.9 | 1.0e-13 | 2.1e-10 | 40.0 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 1 | Cadherin | 55 | 103 | 0.0 | 329.1 | 1.5e-06 | 0.0031 | 17.7 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 2 | Cadherin | 141 | 235 | 0.0 | 329.1 | 1.2e-11 | 2.5e-08 | 34.0 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 2 | Cadherin_2 | 195 | 206 | 1.7e-13 | 49.9 | 1.3 | 2800.0 | -2.1 |
| pfu_aug2.0_184.1_13755.t1 | 3 | 1 | Cadherin_pro | 243 | 326 | 5.3e-06 | 26.1 | 0.083 | 180.0 | 2.0 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 3 | Cadherin | 249 | 342 | 0.0 | 329.1 | 1.2e-15 | 2.5e-12 | 46.8 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 3 | Cadherin_2 | 280 | 308 | 1.7e-13 | 49.9 | 1.5 | 3100.0 | -2.2 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 4 | Cadherin | 362 | 453 | 0.0 | 329.1 | 1.4e-17 | 3.0e-14 | 53.0 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 4 | Cadherin_2 | 365 | 379 | 1.7e-13 | 49.9 | 2.6 | 5600.0 | -3.1 |
| pfu_aug2.0_184.1_13755.t1 | 3 | 2 | Cadherin_pro | 459 | 545 | 5.3e-06 | 26.1 | 0.0026 | 5.4 | 6.8 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 5 | Cadherin | 467 | 557 | 0.0 | 329.1 | 6.8e-22 | 1.4e-18 | 66.8 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 5 | Cadherin_2 | 505 | 529 | 1.7e-13 | 49.9 | 0.03 | 64.0 | 3.2 |
| pfu_aug2.0_184.1_13755.t1 | 3 | 3 | Cadherin_pro | 566 | 646 | 5.3e-06 | 26.1 | 3.5e-05 | 0.074 | 12.8 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 6 | Cadherin | 571 | 660 | 0.0 | 329.1 | 1.3e-20 | 2.7e-17 | 62.8 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 6 | Cadherin_2 | 571 | 591 | 1.7e-13 | 49.9 | 0.063 | 130.0 | 2.1 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 7 | Cadherin | 689 | 768 | 0.0 | 329.1 | 1.1e-15 | 2.4e-12 | 46.9 |
| pfu_aug2.0_184.1_13755.t1 | 7 | 7 | Cadherin_2 | 717 | 732 | 1.7e-13 | 49.9 | 2.4 | 5000.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_184.1_13755.t1 | gi|676459370|ref|XP_009055278.1| | hypothetical protein LOTGIDRAFT_82027, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_184.1_13755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13755.t1 atgtggcttgccggtctattgtttatcaacgcttttctctccatctttctcgctgtttctgggaacaccatccagtatca agtgacagaggaaacaggagctaatttcttcatcggcagtatcttacaagatgcaaatattgcttcgcgggtgaacgaca ccaaaaacttagaattcagtcttctatcgtcaggaaatggagctgcgtcgaacttcttcgtcgatgcaaaaaatggcagc attttcaccaacaaatctctggacagggatacgatatgtcagtatgaggacatatgtgtgctcagtgtaggagttgttgc taaatcccccgggaacgaattcttcgaaataattaaaatagaggtagaaatcctggatataaacgatcatgcaccagttt tccaacattcgacagctcagctacagatttccgaaaacgtagctataaacacaaccttttccttggacggcgcggtagat cttgattcggaagaattttccgtgaggagatacgaaattgcgaacgctgatgttcctttccgagcggaagctgactcata tccggatggcaggtcaatgctgcgtttgattgttacagaaccacttgatcgggaacggcaaagcttttttcagattcaga tttctgccatcgatggcggagaccctcctttttccggatatctgttcttggagatcgaaataaccgacgttaacgacaac tacccgacattttccaaaccatcttacaatgttaccgttgacgacagcagtgactttgacacaattgttaccaaggtaac ggcgtatgatgaagattcagatgagaatggccaagtcgagtacaggtttgcgaaactacagtcctctgatatttttgaac attttgccattaacatttcccatggtgtgatttctgtgaagaagagcttccatacaactcaaaaggaatcatttaccatt aaagtagaagcgacagatcaggggaagcaaccgcttgtttcgcaatgctttgtttatgtgaagatcagagacacatacaa cgattatcctgtgataaacgtgaacattctttcggacggaactgtagcggaagtttctgagcatgccagttacggttccg ttattgcgcatgtcgccgtaagtgacccggatactggagctaacggcttagtcacgtgcacaatttcggcgggtaatttt ggtattcaaagattcgatgatgatgaaaatgaatataaaattaccgtcgctgcgtcattgaatcgagaggtaatggattc gtatgacgtcacgataaaatgttccgatgcaggtagtccgcctagaatttcaaatgcgacatttgaagtgaaagttttgg atgaaaacgaccacacgccaactttttatcagaaaatctacgaagtttctgtcaaagaaaataaccgcaaaggaatacat attctcgacgttttagctgtagactatgatatcagcttaaacagtgccataacgtactcaatcgcttctatcatggaaga tagaattaccataaataaggacaacggctccatctacgtcaatatggctctcgataaggaaacgttggataaattttcat tctacgtttttgcctctgatgaagggacgccacccctgacaggaacggcaactgttacagtacttgtagaggacgaaaat gataacgcacccaaattttctgatccaaattttactttcagcgttaaagaaaatatgccgccgcaaacatacgttgggac attgagagccgacgatgcagattcggatagaaatggcaaaatcttttatcgcctgcccttcggctcagaaaaaggaccgg ttaaagtctcggagaatggtagcatatacacggatcagagttttgatagagaagttcaacaaatgtacagatttttcgtc gaggcgtctgataaaggagttccgacgaggacaaccagagctgaaattctgttagaggttcttgacgagaatgacaacga accggtgtttgtgttcccgaatggtagtaacaataccgtcatcttaacgtacggtggatcaaaaagtacgaaagtggcta cgttacaggcactagatgctgatgtcggcactaatgcaaggctggcttacttttcaaatgatcgaaattactctgatata tttgctataaatagtggcaacggcgagcttgttctgatcagaaatcttggcgctacagacatggggtcttacaagcttga tgttctagtcaaggacagtggacagccgccattatacaaccaaggaacacttatggttgtcgtaaaatcaccgatggaac cggaagtacagaaatactctaaatattatgtcatcgccatcaccatggcaatagtgacggtgacaattgcacttttgata cttttgatcatctttttcatcagacgacgtgaaaggcaagcgttgaacgagtctaacgctagacaacagtttattgacaa aataaaggagggagaagaggcagggttttccccggaagatagcctgagtatatctaaggacgtgtactacccacctggtt atgagtttggtacaaccacgagacagttccatacgttagagagagcaaagtcatatcaggttccatcgacgattgcggaa caggataccggttttcaggaccgagttttacttcagttacaagcgcctatttgggagaaccaggaggcggacgaggagga acgccaccggaatcagatcctaagtctacagtatcaacagaatctaataaagattaaaagtgtcaaacgatctcattctg ttctgactttgtag |
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Protein
| Protein ID | pfu_aug2.0_184.1_13755.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_184.1_13755.t1 MWLAGLLFINAFLSIFLAVSGNTIQYQVTEETGANFFIGSILQDANIASRVNDTKNLEFSLLSSGNGAASNFFVDAKNGS IFTNKSLDRDTICQYEDICVLSVGVVAKSPGNEFFEIIKIEVEILDINDHAPVFQHSTAQLQISENVAINTTFSLDGAVD LDSEEFSVRRYEIANADVPFRAEADSYPDGRSMLRLIVTEPLDRERQSFFQIQISAIDGGDPPFSGYLFLEIEITDVNDN YPTFSKPSYNVTVDDSSDFDTIVTKVTAYDEDSDENGQVEYRFAKLQSSDIFEHFAINISHGVISVKKSFHTTQKESFTI KVEATDQGKQPLVSQCFVYVKIRDTYNDYPVINVNILSDGTVAEVSEHASYGSVIAHVAVSDPDTGANGLVTCTISAGNF GIQRFDDDENEYKITVAASLNREVMDSYDVTIKCSDAGSPPRISNATFEVKVLDENDHTPTFYQKIYEVSVKENNRKGIH ILDVLAVDYDISLNSAITYSIASIMEDRITINKDNGSIYVNMALDKETLDKFSFYVFASDEGTPPLTGTATVTVLVEDEN DNAPKFSDPNFTFSVKENMPPQTYVGTLRADDADSDRNGKIFYRLPFGSEKGPVKVSENGSIYTDQSFDREVQQMYRFFV EASDKGVPTRTTRAEILLEVLDENDNEPVFVFPNGSNNTVILTYGGSKSTKVATLQALDADVGTNARLAYFSNDRNYSDI FAINSGNGELVLIRNLGATDMGSYKLDVLVKDSGQPPLYNQGTLMVVVKSPMEPEVQKYSKYYVIAITMAIVTVTIALLI LLIIFFIRRRERQALNESNARQQFIDKIKEGEEAGFSPEDSLSISKDVYYPPGYEFGTTTRQFHTLERAKSYQVPSTIAE QDTGFQDRVLLQLQAPIWENQEADEEERHRNQILSLQYQQNLIKIKSVKRSHSVLTL |
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