Gene
| Gene Model ID | pfu_aug2.0_1842.1_08604 |
|---|---|
| Locus | scaffold1842.1 : 41031 ... 48655 : - |
| To GenomeBrowser | scaffold1842.1:41031..48655 |
| Genes list of scaffold | scaffold1842.1 |
| Synonym | pfu_aug1.0_21886.1_40322 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coagulation factor x | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1842.1_08604.t1 | 1 | 1 | Trypsin | 135 | 380 | 0.0 | 173.2 | 0.0 | 0.0 | 172.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1842.1_08604.t1 | gi|260820776|ref|XP_002605710.1| | hypothetical protein BRAFLDRAFT_218346 [Branchiostoma floridae] | 3.0e-39 |
| pfu_aug2.0_1842.1_08604.t1 | gi|471400300|ref|XP_004383019.1| | PREDICTED: coagulation factor X [Trichechus manatus latirostris] | 1.0e-37 |
| pfu_aug2.0_1842.1_08604.t1 | gi|387915356|gb|AFK11287.1| | habp2-prov protein [Callorhinchus milii] | 3.0e-37 |
| pfu_aug2.0_1842.1_08604.t1 | gi|641647072|ref|XP_003240058.2| | PREDICTED: trypsin-1-like, partial [Acyrthosiphon pisum] | 2.0e-36 |
| pfu_aug2.0_1842.1_08604.t1 | gi|75773761|gb|AAI04608.1| | F10 protein [Bos taurus] | 3.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1842.1_08604.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1842.1_08604.t1 atgaatccccaggcgttcaagtcaaagaaattaacgtttggaggaaattccaaaccaaatcaatttcgacccctcagaag ggatggaatcatccaaagtgattcacatggtttacaagacgacattccgtctgaagccactattcagaaactcttacgac gaactgataacttagaaaacttcaaagaaaaaatggcaaaaatcaatagaattataacgagagaacgaaacaaaaagaga aagcgacagagaaagagaaataaaagaaagtacaggaaacgttatcaacgaaatcggagagtgaagaataaattgcgaaa aaatgctggaaatgaaagaagttctcaatctcctagtttcaatatgaagtccaaaagtggcaaaaaacttaaaggtggat tcatcattaatggcgatacagtaactgatcttagtacggtgccatatcaggtcggaatctggctgaagatggacggtaaa ctgaaacaccactgtggaggaactattttaaacaaatatttgatacttacagcagctcactgttttcaaaaatcacactt tgctcgagattatatcattcgtgttggtgatttgaatatagggaaggaggagagacatgagcaaagctttgaagtatggc tcacattcatacacccatcattcaaagttaacagaattggtggatttgactatgatgtagctatagttcttgttaaacca aacacaaggggatatatacggtacaaacgtgatgtaagacctgcctatttgcctgacagagatttgaggatttttcctag aaaacattgttatgcttctgggtggggacgaactactacagatttgtcgggcccgtttagtgactcgcttcaaattgcaa gaacggacatactagatagaaatgatcaaagacgatgtaacgagtcatacaagggaatgttaactcagaatatgttatgt gccggatacctggatgctacaccgatagatgcgtgtgtaggggacagtggaggacctcttgtttgtaatattcaaaataa ggacgtcgttgtcggtattatctcatggggaacaataagatgtgcaatgaaaggataccctggaatctatgctaacgtac aggaactcttaccatggttggaatcatttggctcctag |
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Protein
| Protein ID | pfu_aug2.0_1842.1_08604.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1842.1_08604.t1 MNPQAFKSKKLTFGGNSKPNQFRPLRRDGIIQSDSHGLQDDIPSEATIQKLLRRTDNLENFKEKMAKINRIITRERNKKR KRQRKRNKRKYRKRYQRNRRVKNKLRKNAGNERSSQSPSFNMKSKSGKKLKGGFIINGDTVTDLSTVPYQVGIWLKMDGK LKHHCGGTILNKYLILTAAHCFQKSHFARDYIIRVGDLNIGKEERHEQSFEVWLTFIHPSFKVNRIGGFDYDVAIVLVKP NTRGYIRYKRDVRPAYLPDRDLRIFPRKHCYASGWGRTTTDLSGPFSDSLQIARTDILDRNDQRRCNESYKGMLTQNMLC AGYLDATPIDACVGDSGGPLVCNIQNKDVVVGIISWGTIRCAMKGYPGIYANVQELLPWLESFGS |
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