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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1842.1_08607
Locus scaffold1842.1 : 92785 ... 98395 : -
To GenomeBrowser scaffold1842.1:92785..98395
Genes list of scaffold scaffold1842.1
Synonym pfu_aug1.0_2565.1_37320

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1842.1_08607.t1 2 1 Peptidase_C14 66 104 2.0e-25 89.9 0.079 1200.0 -1.1
pfu_aug2.0_1842.1_08607.t1 2 2 Peptidase_C14 130 503 2.0e-25 89.9 8.1e-29 1.2e-24 87.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1842.1_08607.t1 gi|676473818|ref|XP_009059943.1| hypothetical protein LOTGIDRAFT_73381, partial [Lottia gigantea] 8.0e-20

Transcript
Transcript IDpfu_aug2.0_1842.1_08607.t1
Definition-
>pfu_aug2.0_1842.1_08607.t1
atggaatctaaatcagggaaagaggatgaccttgttgcagaatatagatatacagaatgtcatccagatggcgtcatgaa
aaaagtccaaaaacagttacaaaaattgaaactgaaatggatgccttcaaagaaatatcagaatttgtcaaaagaaaact
ttgagggggaaaatatggagacatcactctctgtatcagtggacaaagacacaggtgaagacaaattgtcaaaaactgac
actacacatacggctgttagagaaattgatgagaatgtaaaggaaattatagaatcttcttccccgcccaatgttacagg
gagcactataagtaaaccacaccaccagcagagacgtatgtatgactttacacatcgtaaacgaggatttgctgttcttg
tcatatacaatgagttccagcatcaaccaaagagggacagtgcaattcttgacatagatagcatgacagctgtcttccaa
actctgggctttgatgtgttatgtctacagaatcaaacgacagaacaattgataaagaatatgaaagttatcggtgagca
catcaaagaggatcatgactgctttgcttgtgttgtgagcacacacggtgcagagaccaagaaaaaaggctctcagttac
ggcaacaattactgtatacttatgatggaactgtgagttgtgaagaactttttgagattttcaaagacagaaaatgtaag
gctcttcgaggtaaaccaaggatttttttcgtacaggcttgtagaggggtcatgccagaaagaaagaaccattcggacat
agaccgaggtaccgatgttaatatcagcagtccctacgtaaaaggaagctcggcagctaactttaataacagaagtaccc
cgagtggcaaagacaaccccgttccattagaacaaacacagagtaacagaaatgaaattgaaagtacagcggacacaaga
catgggtatgaagattataattatgctaatcgaagatcagaagattgtcaaggacaggataacatgtacgcaaagtttga
tgatgcaatgggacagattgatgatatcaccaggcgaattcagcaacgaacaatgtcacctgggggatcgcaaggtgtcc
atcaacatactggagtcaggaatgagtctagtagaaattatgagaggaatggctatatgcagaacaatgtcatggaagat
aaacgaaacgaacaaagtcgtctgataccaaaaggatcaaatgttaattcacagaatataccttttgcagatgacatgac
ggagttttacgtaccgaaaccgctaaaaccattagatttttgtacaattcctgtgtacaatgactatgtagccatgttct
cagccgcctctggtacaatagcttggagtgacggtgataaaggaggatggttactcttctgcctgtacaacgtcgtgaag
gctctcagaaagtctgacttcgaaatcgatctcttacagattctcactgatacagctggtaaaatggccatagaaatgag
gtcgtataattctaatcctaaatacgatggtgccaaagctgctgctgtagtttaccatagactcaggaaagaaatatatt
taacaccaaaatcacatgatctcgaaacatataatgtctga

Protein
Protein IDpfu_aug2.0_1842.1_08607.t1
Definition-
>pfu_aug2.0_1842.1_08607.t1
MESKSGKEDDLVAEYRYTECHPDGVMKKVQKQLQKLKLKWMPSKKYQNLSKENFEGENMETSLSVSVDKDTGEDKLSKTD
TTHTAVREIDENVKEIIESSSPPNVTGSTISKPHHQQRRMYDFTHRKRGFAVLVIYNEFQHQPKRDSAILDIDSMTAVFQ
TLGFDVLCLQNQTTEQLIKNMKVIGEHIKEDHDCFACVVSTHGAETKKKGSQLRQQLLYTYDGTVSCEELFEIFKDRKCK
ALRGKPRIFFVQACRGVMPERKNHSDIDRGTDVNISSPYVKGSSAANFNNRSTPSGKDNPVPLEQTQSNRNEIESTADTR
HGYEDYNYANRRSEDCQGQDNMYAKFDDAMGQIDDITRRIQQRTMSPGGSQGVHQHTGVRNESSRNYERNGYMQNNVMED
KRNEQSRLIPKGSNVNSQNIPFADDMTEFYVPKPLKPLDFCTIPVYNDYVAMFSAASGTIAWSDGDKGGWLLFCLYNVVK
ALRKSDFEIDLLQILTDTAGKMAIEMRSYNSNPKYDGAKAAAVVYHRLRKEIYLTPKSHDLETYNV

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