Gene
| Gene Model ID | pfu_aug2.0_1850.1_01866 |
|---|---|
| Locus | scaffold1850.1 : 2996 ... 49705 : - |
| To GenomeBrowser | scaffold1850.1:2996..49705 |
| Genes list of scaffold | scaffold1850.1 |
| Synonym | pfu_aug1.0_3381.1_01441 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1850.1_01866.t1 | 4 | 1 | VWA_2 | 323 | 355 | 1.9e-11 | 44.3 | 0.057 | 210.0 | 1.8 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 2 | VWA_2 | 362 | 455 | 1.9e-11 | 44.3 | 0.001 | 3.7 | 7.6 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 1 | MIB_HERC2 | 496 | 541 | 1.4e-32 | 111.4 | 1.8e-10 | 6.8e-07 | 29.1 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 2 | MIB_HERC2 | 566 | 625 | 1.4e-32 | 111.4 | 1.5e-13 | 5.7e-10 | 39.0 |
| pfu_aug2.0_1850.1_01866.t1 | 2 | 1 | WWE | 694 | 733 | 1.0e-14 | 53.6 | 6.9e-07 | 0.0026 | 17.1 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 3 | VWA_2 | 1075 | 1196 | 1.9e-11 | 44.3 | 1.7e-10 | 6.2e-07 | 29.6 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 4 | VWA_2 | 1200 | 1223 | 1.9e-11 | 44.3 | 0.5 | 1900.0 | -1.2 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 3 | MIB_HERC2 | 1315 | 1346 | 1.4e-32 | 111.4 | 4.0e-08 | 0.00015 | 21.6 |
| pfu_aug2.0_1850.1_01866.t1 | 4 | 4 | MIB_HERC2 | 1383 | 1438 | 1.4e-32 | 111.4 | 1.1e-12 | 4.2e-09 | 36.2 |
| pfu_aug2.0_1850.1_01866.t1 | 2 | 2 | WWE | 1506 | 1573 | 1.0e-14 | 53.6 | 9.3e-13 | 3.4e-09 | 35.9 |
Transcript
| Transcript ID | pfu_aug2.0_1850.1_01866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01866.t1 atgtgtaatcatgttaataattcatcgaatcaacaacaaagaaaggaggggatcttcaacaacactaggctgcaacaccc acagcaaaacgtcaaaacacccagtgcaaaacacagagaagacacgcacagaaagagacacaaaagattggacgctggaa atggcgatgaaaatgtaaaaagggcaaaggaaatcctgattaacttacaagcattagagaagcgtgatgaagatcgggaa agagcacttgagatacttcagaagaaaattaacttgttgcatgaaaaagttgaaacattaactagccaaaatggtcaaag tgcaaaacatgtaacaaagaaatcaggtcaaatgcgttacaagcaaatttcaaattatgattttggaattgatcctgaaa gaacaagtgagtcagtagacgcaaaatcaagtcaagactcagaaaatgtttcacatctaaggacctggagcaagtccgaa gaaacattatgtaaagatatagttgaaaatgttaaagattacgacttcattaagattcaacaatttttgacggcgactct gaagaaagacaacattggattcaaattcaaagaaactgacagaagtgttgataatagggtcagactgctgtatagagaga aatgtgtacatggtgaattgataaaagattccagatcacaacatctcgcacccaaaattataaacaatccaacagaaaat aacctttccattcttaaagaattccagccaatgaaagaaaacattggatgtgaatctaaaatgagatctgagttgaagca acaagatcattcaagaagcaagggtgacttcgagactttggaccttatgagaagtcctggcgagatcccgagaatcagag atctgaattcatggcgtcatattgcagaggaagagaaaaatagaggtattgaggaagttgccacttctcttcctgtattc attgagaatataggaatagctacttttggacattacattggagttgtgcaacacatgacaaatgattataaaaagatcca agatatactagaaagtttaggcattcccaatattttttgcaagatgataatgttcacagatgggaaagctacgtctgatg ttcacattcaaaaggatgctgacgatccactgtccaatagtactgagacattgaagataagtatggcactgcatgaaacc agctgtgatatcggtagacgtgacatacgggtctactgctatgccattggatgtgaaaacgataatattgcattgggtgt taaagacaacatacctgacctccagaatctagatgattccgccatgagagaagtgtgtcaagctttacacgtaggactat tggattccaaccgtgacatggatgaagtcatacatttgatcaaattctaccggaacaggacgaaaggtaccaatcaagat gacagtcgttacttggaaatgaatgaccctgtcttaccaccgcttggtacgagagtaaggcgtggtccgaactggagctg gggttaccaagactccgatggaccgggtaccatagtcggacattcgccaggtcatctatgggttgagtgggacagcggtc atatgaacgtatataagtgtaatccgatttttggctttgatgtgatgaccgttaatgaacctcgaatcctcagaggcgat gaattgatagctgttggatgtcttgttcaaagaggagcagactggagattcgatgatcaggatggaggcgacggtaacgt aggtgtggtaatcagggtagacaaaaatgcaaccgtagtggtacgctggccgaacaagcaaaaggtagtctataagtacg gaaacgacgggttctttgagataaaattatgcgatccctcaaaagtctatggtagtcaaggaaatctgaaaataaacact tcgggctcaggacaactatcaactgaggtgaccatgcaaacaaatacgtccataaaggctacgaaaaagcaaccatccac gacggaaaagtcaaactccatatccttggtgtcgaaagatgacatgacaaaaagcatcagaaaagtaactgtgactacag atgtatcgtggagttataagaaagatgatacttggtatgtgtacccagacaatgtcaacaccaagatagagaaagctttt caaagaaacagtcaactttgtatagtggagttacatggggatattgaggatgtcggaaaagcaaataaaaatgtccatag ggcaaaggaaatcctgattaacttacaaatagtagcgaaacgggataaagatagggaaaaatcacttcaaactctggagg agaaggtcaacaaattgtacgaaaaagttgaaactctcaatcaaacgcctcaaactcgccaaagtgttaaacgcataaga aaaacattaagaaccaatgtgcaaaaaactgaatcagcacgcatgtgtttcgaaacacctcctgattgtgatgcatcggt cgactctaaaaatggcataaaaactgaacagataaattcatgtcaagaaacaacaaagattcaatatattaagaaagaga gtgaatcagaactgttcgatacttcgctctattgtgatccttcattcgactctgaaattggtaaaacgactgttcagatt aatccaagtcaagaagcaacaaagattcagtacgttagcaaaagttgtgagtcagaagacaatcagataaatacaagtca agaagctacaaagatccaatatgttagcaaaaagaatgaatcagaagataatcaaaacgcagatgcttttgccctcccta aagaggttacagctcatacacagattaaaattgagcagtttttgacggagacgctgaagaaagacaatgttggtttccga ttcaaagtaactgaaaggaatattgacaatcggataagaatggtgtacggagagaaaaatgcacccggaaaactgctgat ggacactctggcaaaacatcagccggttgattctgctgatatgccgacgaaaaatgttttgcacagtggcaaagaagttt ccttagttcaaaaactagggataatacctaaaacaagttttctgtacgaaatttcagcatgccacctaagcgtttctgag acagtctctagcatcgtagatttgaatacttggcgcagtattgcagaaaaagaaagaaaaagaggcgtgtattcagatgc cccaaagaacgaggcaggcttagacacatgtctgttattggacatatccgagagtatgataggaggggcatttgacgaaa tgataagaagggcgaaactgtatgttcaaggtattgaggatatttctaaaacacttccccacttcacggagaatattggc atagctacatttggccattccatcggagtcgtgcagtatatgacatgcgattacaagaggataaaagacgcactagatat gctgacacctggtggatcgtctccgatgtccgcgggactgtacatgggattggcttgttgcctcggtaacaaatccgtac atttaagaagtccaccgatgtatagcaagatgataatgttcactgatggcaaagctacctcagacacaacaatccaatca gataccgactttcctccatctgatcatacagaaacccttattacttatctgcagacaatcacagagaacacagaaggaaa gatctatagaggagatgatatccacaagttgataagaatgacccaaacagcgaatgttgctttgggtatcaggcaaaatt atcctgatgttgacaaccttgatgaagccacaacaaaagatctttgtcaaactatggtttttagtggcgacttcgaagaa gtcatacatttaataagattctttagaaacaagatgaaaagtttcgttactccggacgaaaaacattacaatgaagcaag tgattctagcctaccgccagtgggtacacgggtaaggcgtggtccagactggagttgggggtatcaggatactgggggac cgggcactgttgtaggaaatagtagcccaggtgactcttacatagctaggcagagaaagagtgtacatttacctagaaaa cgtagtagaatcatcataggctcgtacaaattccttatatttaaaaaattacatttttatcaaaatatgaaaggagcgaa ttggaaatttggtgatcaggatggaggtaaaggcaatgttggtgtagtcattaaggtggagcaaaatgcaaccgtaatgg ttcgatggccaaacaagaaaaaggcagtctacaagtatggaaacgacggattatttgagattgaaatatgtgatcccttc aaagtctcaggaagtcaaggaaatctgaaggtacctacttcgagctctggaaagcacggaatcgaaaagggtaatataca acacgagacgttaacgatagttaagaaaacgccaccattggaacacaaaaagtcagaaactccacccttgacgacgaaag tgagcgagacgaataaaagtagtacaagaaaagtagcatttgcagatgcatcgtggagttacaagaaagatgacacttgg tatgtgtatccggacaatgttaataccaagatagagaaagcgtttcaaaggaacagtcaactttgtatcgtgcagttaca cggagatatatttcagatctcatacaagaaaatggtacaaatttgcaataagacgggacaggtcacacaagtgaagagag atgataaaaaagggcaactggaataa |
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Protein
| Protein ID | pfu_aug2.0_1850.1_01866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01866.t1 MCNHVNNSSNQQQRKEGIFNNTRLQHPQQNVKTPSAKHREDTHRKRHKRLDAGNGDENVKRAKEILINLQALEKRDEDRE RALEILQKKINLLHEKVETLTSQNGQSAKHVTKKSGQMRYKQISNYDFGIDPERTSESVDAKSSQDSENVSHLRTWSKSE ETLCKDIVENVKDYDFIKIQQFLTATLKKDNIGFKFKETDRSVDNRVRLLYREKCVHGELIKDSRSQHLAPKIINNPTEN NLSILKEFQPMKENIGCESKMRSELKQQDHSRSKGDFETLDLMRSPGEIPRIRDLNSWRHIAEEEKNRGIEEVATSLPVF IENIGIATFGHYIGVVQHMTNDYKKIQDILESLGIPNIFCKMIMFTDGKATSDVHIQKDADDPLSNSTETLKISMALHET SCDIGRRDIRVYCYAIGCENDNIALGVKDNIPDLQNLDDSAMREVCQALHVGLLDSNRDMDEVIHLIKFYRNRTKGTNQD DSRYLEMNDPVLPPLGTRVRRGPNWSWGYQDSDGPGTIVGHSPGHLWVEWDSGHMNVYKCNPIFGFDVMTVNEPRILRGD ELIAVGCLVQRGADWRFDDQDGGDGNVGVVIRVDKNATVVVRWPNKQKVVYKYGNDGFFEIKLCDPSKVYGSQGNLKINT SGSGQLSTEVTMQTNTSIKATKKQPSTTEKSNSISLVSKDDMTKSIRKVTVTTDVSWSYKKDDTWYVYPDNVNTKIEKAF QRNSQLCIVELHGDIEDVGKANKNVHRAKEILINLQIVAKRDKDREKSLQTLEEKVNKLYEKVETLNQTPQTRQSVKRIR KTLRTNVQKTESARMCFETPPDCDASVDSKNGIKTEQINSCQETTKIQYIKKESESELFDTSLYCDPSFDSEIGKTTVQI NPSQEATKIQYVSKSCESEDNQINTSQEATKIQYVSKKNESEDNQNADAFALPKEVTAHTQIKIEQFLTETLKKDNVGFR FKVTERNIDNRIRMVYGEKNAPGKLLMDTLAKHQPVDSADMPTKNVLHSGKEVSLVQKLGIIPKTSFLYEISACHLSVSE TVSSIVDLNTWRSIAEKERKRGVYSDAPKNEAGLDTCLLLDISESMIGGAFDEMIRRAKLYVQGIEDISKTLPHFTENIG IATFGHSIGVVQYMTCDYKRIKDALDMLTPGGSSPMSAGLYMGLACCLGNKSVHLRSPPMYSKMIMFTDGKATSDTTIQS DTDFPPSDHTETLITYLQTITENTEGKIYRGDDIHKLIRMTQTANVALGIRQNYPDVDNLDEATTKDLCQTMVFSGDFEE VIHLIRFFRNKMKSFVTPDEKHYNEASDSSLPPVGTRVRRGPDWSWGYQDTGGPGTVVGNSSPGDSYIARQRKSVHLPRK RSRIIIGSYKFLIFKKLHFYQNMKGANWKFGDQDGGKGNVGVVIKVEQNATVMVRWPNKKKAVYKYGNDGLFEIEICDPF KVSGSQGNLKVPTSSSGKHGIEKGNIQHETLTIVKKTPPLEHKKSETPPLTTKVSETNKSSTRKVAFADASWSYKKDDTW YVYPDNVNTKIEKAFQRNSQLCIVQLHGDIFQISYKKMVQICNKTGQVTQVKRDDKKGQLE |
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