Gene
| Gene Model ID | pfu_aug2.0_1850.1_01867 |
|---|---|
| Locus | scaffold1850.1 : 56417 ... 69745 : - |
| To GenomeBrowser | scaffold1850.1:56417..69745 |
| Genes list of scaffold | scaffold1850.1 |
| Synonym | pfu_aug1.0_3381.1_01441 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1850.1_01867.t1 | 4 | 1 | MIB_HERC2 | 179 | 235 | 2.4e-20 | 72.2 | 6.8e-14 | 5.0e-10 | 39.1 |
| pfu_aug2.0_1850.1_01867.t1 | 4 | 2 | MIB_HERC2 | 249 | 308 | 2.4e-20 | 72.2 | 3.9e-15 | 2.9e-11 | 43.1 |
| pfu_aug2.0_1850.1_01867.t1 | 4 | 3 | MIB_HERC2 | 385 | 393 | 2.4e-20 | 72.2 | 0.74 | 5500.0 | -2.6 |
| pfu_aug2.0_1850.1_01867.t1 | 4 | 4 | MIB_HERC2 | 414 | 426 | 2.4e-20 | 72.2 | 1.6 | 12000.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1850.1_01867.t1 | gi|167381029|ref|XP_001735543.1| | hypothetical protein [Entamoeba dispar SAW760] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1850.1_01867.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01867.t1 atggtagattacatttcattggttgtagatagtccagccgtcctgagtaaagtgatcatgttcactgacgggaaagctac gtcagacatcgtcatccaatcagatgctgacgatccaccgtccaataatactgaaaaattgatgatacatttagctttga cggaaagtagcaaagacataggcaaacgtgacatacgtgtctactgttacccaattggatgtgaaaatgacaccttcata aagataataacggagaatacggacggaactattttcagaggagatgatatccataaactgattcgtatgagccaaaccac gcgccttgcatttgaactgaaagacaacttgcctgaggcagagggatttgactcctccttcattaagcaaatgtggaaag atctgggtatgccgctagataaagacttcgatgaagcgatagatttggcaaagttcttccgtaagaagttgaaaagttca gattcatcagagggacgttacgctgaaagtgatgactcagacttgcctcccctggggacacgagtcaggcgtggtcccga ctggagctgggggaatcaagactctgggggatcgggcactgtagttggccacacaaaaggccaagtttgggtagagtggg acagtggtcatgtcaacgtttataaataccacgcagtagttggatatgatgttctcatagtgcaggaaccccgtatcctc aaatctgatgaactaattgctgttggatgtctcgtacaaagaggagataattggagatataaagaacaagatggcggagt gggcaatgttggaacagtcatcaaagtgaacaaggatgcaactgtcgtggtacgatggcccaacaaacagaaagcagtgt ataagtacggaaaagacggatactttgaagtgaagatatgtgaaccgtcgaacgtttatgggaacccaggtaatcagaag acgcatgtatggggctctggacagcagcttggtgatggtacagaacaacaaccagacaccgcgagtaaagataaacctga accagaatctgaggataatctaaccatatcaccatctgtagatgaaatgaataaaaagaatacaagaaaagaatatgtta tcagtgttaatattaaaagttcgtctgaatatgaaaagactaaatatcgttatggcaaccattatcttgattattataaa ttccaagtggcatttaaaaagatggtacaagtttgtgagaagacggggacaatcacacaagtaagaagagttgataaaag tggcataaccggcgagagttcagattaa |
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Protein
| Protein ID | pfu_aug2.0_1850.1_01867.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01867.t1 MVDYISLVVDSPAVLSKVIMFTDGKATSDIVIQSDADDPPSNNTEKLMIHLALTESSKDIGKRDIRVYCYPIGCENDTFI KIITENTDGTIFRGDDIHKLIRMSQTTRLAFELKDNLPEAEGFDSSFIKQMWKDLGMPLDKDFDEAIDLAKFFRKKLKSS DSSEGRYAESDDSDLPPLGTRVRRGPDWSWGNQDSGGSGTVVGHTKGQVWVEWDSGHVNVYKYHAVVGYDVLIVQEPRIL KSDELIAVGCLVQRGDNWRYKEQDGGVGNVGTVIKVNKDATVVVRWPNKQKAVYKYGKDGYFEVKICEPSNVYGNPGNQK THVWGSGQQLGDGTEQQPDTASKDKPEPESEDNLTISPSVDEMNKKNTRKEYVISVNIKSSSEYEKTKYRYGNHYLDYYK FQVAFKKMVQVCEKTGTITQVRRVDKSGITGESSD |
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