Gene
| Gene Model ID | pfu_aug2.0_1850.1_01870 |
|---|---|
| Locus | scaffold1850.1 : 93006 ... 100641 : + |
| To GenomeBrowser | scaffold1850.1:93006..100641 |
| Genes list of scaffold | scaffold1850.1 |
| Synonym | pfu_aug1.0_247.1_07430 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1850.1_01870.t1 | 1 | 1 | MACPF | 372 | 574 | 1.5e-30 | 106.5 | 2.3e-34 | 3.4e-30 | 105.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1850.1_01870.t1 | gi|471236468|ref|XP_004040054.1| | MAC/Perforin domain protein, partial [Ichthyophthirius multifiliis] | 2.0e-27 |
| pfu_aug2.0_1850.1_01870.t1 | gi|551610078|ref|XP_005786182.1| | membrane attack complex/perforin domain-containing protein [Emiliania huxleyi CCMP1516] | 1.0e-24 |
| pfu_aug2.0_1850.1_01870.t1 | gi|118371660|ref|XP_001019028.1| | MAC/perforin domain protein [Tetrahymena thermophila SB210] | 2.0e-24 |
| pfu_aug2.0_1850.1_01870.t1 | gi|551611245|ref|XP_005786715.1| | membrane attack complex/perforin domain-containing protein [Emiliania huxleyi CCMP1516] | 4.0e-24 |
| pfu_aug2.0_1850.1_01870.t1 | gi|118396445|ref|XP_001030562.1| | MAC/perforin domain protein [Tetrahymena thermophila SB210] | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1850.1_01870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01870.t1 atggaaagtgaagatgaaataccttgtactcgcgtcaaggtaaacgaagaactagaggtcaacacagggtcaagtgtaac ccaggaaccctgtgactctggaaatgataaggatatgggtgaaaacgtcccactcagtgtgtcagaaactggtcaggctg acaacgaggtcaaaaaggtcatcgaggatgaagagcctcctgctttttacccttcccaagttgacactcagcaaggtcac aatgagacccaagattcctcttataaggtggccgatgtagtgaaatttaagaatttcaaggtcagaggcaaaggtaagaa atgtcccccaccttggataggccccgggatcataactgccataagaggccctaggcatgtagaggtcatgtcatcaaagt ttgacgtcaaggtcatgaaccgtgacaatattaagccctttcagggtaggacctacacaccttgggtcagagccttacgc tatgccctccaaggggcaccgccccaaccaaggtcaaaaccaacccctagtctcgccaaaggtaccagtagggtaccaca atcagataatgtcaagaagaaattcttgtgtccagacagggacaaagatgacctttgggttcaggctatagaggtcaaca tggtttcttgcaagactcgcaacgactggttccatccgaaacgaaagggaaccaccagggagtatgcagaccaacaagtg cagtcagtgtacccccaacacacatactatcacttgcatgggcagagcttagcgaactgcatgagaagtgactatagact acaggagtgtcaaggcccacaattcaagaggtcttttccaaatatagattactctcttttaggctacaatatactccgag gttttccaatggcaactggacatgatccgggatttacaaaaccaatattttcggcagattacacaaatggtattcaaact gcagactgtcgtttcagtatcccaaagggatatgtggtcatcccagacatttcctgtataagttcattttcctctaaaac tgtgaaatcaaattatgaatttgcaagagctttatctgtagcagcaaatataaatgttggtggttggggagcacagtttt ctgcgagtactgaatataaagaaacgttttctgaaatgtcatctggagagtccgttttcatcctttctacagcaaaatgt gactactactttagtaagcttattgagtacgactcgcccccattggatcaaacattcttacgacgcgtacggattttaga aaaatctgtaaccagctatgatttcttcgaattctttaatacttatggtacacattttgctacaatggtgacatttggtg ctagttttacttacgaacataaaatgtctttatcaaaatttgaagaaaagcaaggacaaggaataaaattaggaatacag gcaggttatgcaggtgtggtaagtgttggtggcggatttaatctagacagttctcagcaacagtctgcttctgagttcat gaaagatgtggaaactagaacgatttcagttggggcagccccacctgcaaatggagatgctctgacatgggcatcaactg taaaagataatcccgtacccacccgctatacattagaaagcatcgagaatctcttctcagccaagtattttcactcttcc gaagtagattatcacaaaatcaaaaataagataaaacagtataagggacagtattgtgaatttttgagacagcttggcga agtgaattcatgtctgcaacttcatccaggtgttatgatgaaaaaaaccaaattgtcggttacaaccgaaaaattgcttc tgcctaagcctgattgtgaaaagaaatgttttgaaacacaagtgaataaacaacaacaatgcgaagttgatgatggttat gaaaggcaaattctcgaacaacaagatgagaaaacttccaggaggaagacttatctccaagcatgtaactctgcaagtgt taatcaaattaggggtcccgctgtgttgataggtacataa |
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Protein
| Protein ID | pfu_aug2.0_1850.1_01870.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1850.1_01870.t1 MESEDEIPCTRVKVNEELEVNTGSSVTQEPCDSGNDKDMGENVPLSVSETGQADNEVKKVIEDEEPPAFYPSQVDTQQGH NETQDSSYKVADVVKFKNFKVRGKGKKCPPPWIGPGIITAIRGPRHVEVMSSKFDVKVMNRDNIKPFQGRTYTPWVRALR YALQGAPPQPRSKPTPSLAKGTSRVPQSDNVKKKFLCPDRDKDDLWVQAIEVNMVSCKTRNDWFHPKRKGTTREYADQQV QSVYPQHTYYHLHGQSLANCMRSDYRLQECQGPQFKRSFPNIDYSLLGYNILRGFPMATGHDPGFTKPIFSADYTNGIQT ADCRFSIPKGYVVIPDISCISSFSSKTVKSNYEFARALSVAANINVGGWGAQFSASTEYKETFSEMSSGESVFILSTAKC DYYFSKLIEYDSPPLDQTFLRRVRILEKSVTSYDFFEFFNTYGTHFATMVTFGASFTYEHKMSLSKFEEKQGQGIKLGIQ AGYAGVVSVGGGFNLDSSQQQSASEFMKDVETRTISVGAAPPANGDALTWASTVKDNPVPTRYTLESIENLFSAKYFHSS EVDYHKIKNKIKQYKGQYCEFLRQLGEVNSCLQLHPGVMMKKTKLSVTTEKLLLPKPDCEKKCFETQVNKQQQCEVDDGY ERQILEQQDEKTSRRKTYLQACNSASVNQIRGPAVLIGT |
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