Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1853.1_11904
Locus scaffold1853.1 : 9415 ... 20155 : -
To GenomeBrowser scaffold1853.1:9415..20155
Genes list of scaffold scaffold1853.1
Synonym pfu_aug1.0_1032.1_29544

Manual annotation
Annotation by Blast2GO
Annotation GO
domain-containing protein GO:0008152

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1853.1_11904.t1 1 1 Tyrosinase 128 321 4.9e-30 105.3 5.7e-34 8.4e-30 104.5

Transcript
Transcript IDpfu_aug2.0_1853.1_11904.t1
Definition-
>pfu_aug2.0_1853.1_11904.t1
atgcagttgctgacggtattgatatcgagcctactaatggcggcgtctaccgtcgccatgaatatagaatttttaaaact
catgaagacacaagatttccaaagatgcatcggttacaactcaacacttaacaatttagatcatttatcttcactttgca
ataaattgtttctggagacagtaaaagtcagtaatattgaaggtcgcgacatcaatttaatgttttctcttggaagacaa
atacaaggagagatcgaggctaccaggaacaaacgatacatcagacctctccgtattaggcgggaatgcaggactctgtc
tgaaaaacaacggacaagaatcttctcagcaatagtccaaatgaaagaaggacctgagaacatgtacgacgtctttgcaa
ggattcatctgaactctcaagtactagaaaatgctcatgtcggttcaaacttcccaggatggcatcgtatctttgttctg
ttctttgagaatgcactgaggagaatcgatccaggagtcgtcttatgttattgggatcctactttggactttgtgatgcc
aagcactctccagcttcattccgttaccttctcggatagattatttggtaatggatatgcaacagtcatcaatgggccat
tcaggaactggcgattaataaaaccatacgactacagactcagacgaaatatcggtcaggaaggcagtttgacaagacct
aaggtggcagatttaattggttttaatcctaaaattataagaacaactcaaattttgactggtagtggagctcttggatt
taaagatccagatactggaagaaggcacagccttgaacaatgccatgatcttactcatgtctatgttggcggtgtattca
gcagtctacctgtcacagcacaagatcccatcttctggtttttccacgcctacactgactacatctgggaattgttcaga
caaaaacaacaaagacatggtatagacccatccaaggactaccctgagcatggaggagaggaccatagggctctcagaaa
catggttcctttctttgctttcaggaacatcgacggatacagcaattcctttactgaaaagatatacagatatgccccca
gcccaacatgtggaaaccgatgtggtggagcgtccaaagaattcttgtactgtccacgtggtggtcagcgccgtacaaga
tgcgtgtctcaggctaggaatgtcgacattgttccaaataagacattaatggaaatcaagaaccctatccttgaacagtt
cgtagttggtaacgatgctagcaaagcaatagttaatggatactcatttaagacagcaatacgcgatggtagagtcaatt
taccgaaaccaattttccaagctaattttaatgaccccagagtgtttgttggtaagcatacgaactgggtaggatatagt
ggtggagggtag

Protein
Protein IDpfu_aug2.0_1853.1_11904.t1
Definition-
>pfu_aug2.0_1853.1_11904.t1
MQLLTVLISSLLMAASTVAMNIEFLKLMKTQDFQRCIGYNSTLNNLDHLSSLCNKLFLETVKVSNIEGRDINLMFSLGRQ
IQGEIEATRNKRYIRPLRIRRECRTLSEKQRTRIFSAIVQMKEGPENMYDVFARIHLNSQVLENAHVGSNFPGWHRIFVL
FFENALRRIDPGVVLCYWDPTLDFVMPSTLQLHSVTFSDRLFGNGYATVINGPFRNWRLIKPYDYRLRRNIGQEGSLTRP
KVADLIGFNPKIIRTTQILTGSGALGFKDPDTGRRHSLEQCHDLTHVYVGGVFSSLPVTAQDPIFWFFHAYTDYIWELFR
QKQQRHGIDPSKDYPEHGGEDHRALRNMVPFFAFRNIDGYSNSFTEKIYRYAPSPTCGNRCGGASKEFLYCPRGGQRRTR
CVSQARNVDIVPNKTLMEIKNPILEQFVVGNDASKAIVNGYSFKTAIRDGRVNLPKPIFQANFNDPRVFVGKHTNWVGYS
GGG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495