Gene
| Gene Model ID | pfu_aug2.0_1866.1_21829 |
|---|---|
| Locus | scaffold1866.1 : 55129 ... 62185 : - |
| To GenomeBrowser | scaffold1866.1:55129..62185 |
| Genes list of scaffold | scaffold1866.1 |
| Synonym | pfu_aug1.0_12995.1_32280 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1866.1_21829.t1 | 2 | 1 | BIR | 41 | 79 | 1.3e-11 | 44.7 | 6.7e-15 | 1.3e-11 | 44.7 |
| pfu_aug2.0_1866.1_21829.t1 | 2 | 1 | zf-C3HC4_3 | 48 | 53 | 1.5e-11 | 43.7 | 1.0 | 1900.0 | -1.4 |
| pfu_aug2.0_1866.1_21829.t1 | 2 | 2 | zf-C3HC4_3 | 238 | 280 | 1.5e-11 | 43.7 | 8.2e-15 | 1.5e-11 | 43.7 |
| pfu_aug2.0_1866.1_21829.t1 | 2 | 2 | BIR | 253 | 270 | 1.3e-11 | 44.7 | 7.7 | 14000.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1866.1_21829.t1 | gi|658858875|ref|XP_008412150.1| | PREDICTED: baculoviral IAP repeat-containing protein 7 isoform X1 [Poecilia reticulata] | 9.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_1866.1_21829.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1866.1_21829.t1 atgaatttcggagcgggaaggagcgtcccgcctggactagctccagattccggactgcggattccaagaacaccgggtct ggatcttccagacacattccgaggaaatagttcacagattcaaggagttgcagacagtgtgaggtgttttttctgtgcag tgggactgaggaattgggaccctgaggatgacccttttgttgaacacgcccgctggtcacctaagtgtgcatatctattg gagaaaaaaggggcggagtttgtccaactggtgctaaatgctgttagacagcaggaaatggaagagtctctgtcaggggg acaatcatcagcgtctaattctcaaagtcaggatgtcagtgccgactgtcctatgccacaaagaccagacattcagagtg agtatcaaccaacagcagcggagaagaagaatccattgttgagtgatgcagcacagagcgttctagccatgggttatcta cccaggatcgttaaagttgctgtcaatcagatccttgaaaatgaaggatggaagggtatgaaaggtgaaaagatagcaga cattatattccaaatggaggatcgaggagagatttgtcatgaaaatagcatagtaccagagataagctacgacagctcac gtccaaaattaaatcactctgtacctgaaagtagggagattctagaacaggagaatggtgagatgcgagagaggactctc tgtaagatatgttgtgaacagacagtggccattgtatttttgccatgtggacatttagtaagctgtgctcagtgtgcacc ggctcttaagtcgtgtccggtgtgtagagttggggtgcgggggactgtacgtgtgtgttttgcctaa |
|
Protein
| Protein ID | pfu_aug2.0_1866.1_21829.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1866.1_21829.t1 MNFGAGRSVPPGLAPDSGLRIPRTPGLDLPDTFRGNSSQIQGVADSVRCFFCAVGLRNWDPEDDPFVEHARWSPKCAYLL EKKGAEFVQLVLNAVRQQEMEESLSGGQSSASNSQSQDVSADCPMPQRPDIQSEYQPTAAEKKNPLLSDAAQSVLAMGYL PRIVKVAVNQILENEGWKGMKGEKIADIIFQMEDRGEICHENSIVPEISYDSSRPKLNHSVPESREILEQENGEMRERTL CKICCEQTVAIVFLPCGHLVSCAQCAPALKSCPVCRVGVRGTVRVCFA |
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