Gene
| Gene Model ID | pfu_aug2.0_188.1_27001 |
|---|---|
| Locus | scaffold188.1 : 106436 ... 122005 : + |
| To GenomeBrowser | scaffold188.1:106436..122005 |
| Genes list of scaffold | scaffold188.1 |
| Synonym | pfu_aug1.0_2667.1_23055 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_188.1_27001.t2 | 1 | 1 | Acyltransferase | 241 | 324 | 2.3e-13 | 49.7 | 7.1e-17 | 5.2e-13 | 48.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_188.1_27001.t2 | gi|297299297|ref|XP_001098972.2| | PREDICTED: glycerol-3-phosphate acyltransferase 4-like [Macaca mulatta] | 0.0 |
| pfu_aug2.0_188.1_27001.t2 | gi|74187453|dbj|BAE36691.1| | unnamed protein product [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_188.1_27001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27001.t1 atgataaattatgattctattagtactttaattacattattgtgggtaccagcttgtttactatctcttattgttatagg acttgcatcaacaggcaagtcccttggtttacgaaggttttatacccgtgtgttgctgaaaatttttgagtttggtcagt ggaggatcaagcggtatgaagacacccatcgtcaactggaggaggatagtgaggatagccaacatgctgactgcctcaca gactatgctgtccaggaggtcattaagcgggacatctccctgtctgcagtgggtggtatcaagacctcggcacatagacc tgattatgatatgacagatctgaagagagaatttcatatctctgacatcatgtactttgcaaaatgtggagctgaggctg tcatagaagatgacgtgacaaaacgttttacagctgaagaattaagaacatggaattttcttacacgtacaacacatgga catcagttcataagtgcaaggctaactggtctgtgggtcctaggtggaatatttagatattgcttattgctgccatacag agttgtattgctgtctgttggattgatatggttatttgtgtcaactgctgtagtgggatgtatgggagatagcccgatga aaagaaaagtaaaccagtacatcagcctgatggctcacaggattctgaccagggcatgctcagcagttgttacgtatcat gatagaaggctcaacatcacagtatttttttacatcacaataagaaataacgttagaaattgtgatgctcagtcttggtt tgtgaataatgcaagtctagtggtaggtcaaaggcactctggattcttgggaatggtacaaagtgccctagcaagagcaa cgcatcatgtttggtttgaaaggtcagaggtcaaggacaggcatttggtggcacaacgactcaaagaacatgtaacaaat aagaacaagttacccattctcatatttccagaaggaacgtgtataaataatacatcagttatgatgtttaagaaaggaag ttttgaagttagcgacactgtatatcctgtagctataaaatatgatgctagattcggagatgctttttggaatagtagta aaatgggaatggttcgtcatgttttagatatcttaactagttgggcattagtagctgaagtctggtacctacctccagtg actagaaagaaagatgaaaatgcggttcagtttgccaatagagtaaagaaagagattgccagaaaaggaggattagtaga cttagaatgggatggtcagttaaaaagaatgaaggctaaagattcttggaagtcaaaaccacaagaagatttcagcaaaa tcatcaaagttgactaa |
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| Transcript ID | pfu_aug2.0_188.1_27001.t2 |
| Definition | - |
>pfu_aug2.0_188.1_27001.t2 atgatacatgtagatctaataagtcggatacgtaaagtttcgctctttggtcagtggaggatcaagcggtatgaagacac ccatcgtcaactggaggaggatagtgaggatagccaacatgctgactgcctcacagactatgctgtccaggaggtcatta agcgggacatctccctgtctgcagtgggtggtatcaagacctcggcacatagacctgattatgatatgacagatctgaag agagaatttcatatctctgacatcatgtactttgcaaaatgtggagctgaggctgtcatagaagatgacgtgacaaaacg ttttacagctgaagaattaagaacatggaattttcttacacgtacaacacatggacatcagttcataagtgcaaggctaa ctggtctgtgggtcctaggtggaatatttagatattgcttattgctgccatacagagttgtattgctgtctgttggattg atatggttatttgtgtcaactgctgtagtgggatgtatgggagatagcccgatgaaaagaaaagtaaaccagtacatcag cctgatggctcacaggattctgaccagggcatgctcagcagttgttacgtatcatgatagaaggctcaacatcacagtat ttttttacatcacaataagaaataacgttagaaattgtgatgctcagtcttggtttgtgaataatgcaagtctagtggta ggtcaaaggcactctggattcttgggaatggtacaaagtgccctagcaagagcaacgcatcatgtttggtttgaaaggtc agaggtcaaggacaggcatttggtggcacaacgactcaaagaacatgtaacaaataagaacaagttacccattctcatat ttccagaaggaacgtgtataaataatacatcagttatgatgtttaagaaaggaagttttgaagttagcgacactgtatat cctgtagctataaaatatgatgctagattcggagatgctttttggaatagtagtaaaatgggaatggttcgtcatgtttt agatatcttaactagttgggcattagtagctgaagtctggtacctacctccagtgactagaaagaaagatgaaaatgcgg ttcagtttgccaatagagtaaagaaagagattgccagaaaaggaggattagtagacttagaatgggatggtcagttaaaa agaatgaaggctaaagattcttggaagtcaaaaccacaagaagatttcagcaaaatcatcaaagttgactaa |
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Protein
| Protein ID | pfu_aug2.0_188.1_27001.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27001.t1 MINYDSISTLITLLWVPACLLSLIVIGLASTGKSLGLRRFYTRVLLKIFEFGQWRIKRYEDTHRQLEEDSEDSQHADCLT DYAVQEVIKRDISLSAVGGIKTSAHRPDYDMTDLKREFHISDIMYFAKCGAEAVIEDDVTKRFTAEELRTWNFLTRTTHG HQFISARLTGLWVLGGIFRYCLLLPYRVVLLSVGLIWLFVSTAVVGCMGDSPMKRKVNQYISLMAHRILTRACSAVVTYH DRRLNITVFFYITIRNNVRNCDAQSWFVNNASLVVGQRHSGFLGMVQSALARATHHVWFERSEVKDRHLVAQRLKEHVTN KNKLPILIFPEGTCINNTSVMMFKKGSFEVSDTVYPVAIKYDARFGDAFWNSSKMGMVRHVLDILTSWALVAEVWYLPPV TRKKDENAVQFANRVKKEIARKGGLVDLEWDGQLKRMKAKDSWKSKPQEDFSKIIKVD |
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| Protein ID | pfu_aug2.0_188.1_27001.t2 |
| Definition | - |
>pfu_aug2.0_188.1_27001.t2 MIHVDLISRIRKVSLFGQWRIKRYEDTHRQLEEDSEDSQHADCLTDYAVQEVIKRDISLSAVGGIKTSAHRPDYDMTDLK REFHISDIMYFAKCGAEAVIEDDVTKRFTAEELRTWNFLTRTTHGHQFISARLTGLWVLGGIFRYCLLLPYRVVLLSVGL IWLFVSTAVVGCMGDSPMKRKVNQYISLMAHRILTRACSAVVTYHDRRLNITVFFYITIRNNVRNCDAQSWFVNNASLVV GQRHSGFLGMVQSALARATHHVWFERSEVKDRHLVAQRLKEHVTNKNKLPILIFPEGTCINNTSVMMFKKGSFEVSDTVY PVAIKYDARFGDAFWNSSKMGMVRHVLDILTSWALVAEVWYLPPVTRKKDENAVQFANRVKKEIARKGGLVDLEWDGQLK RMKAKDSWKSKPQEDFSKIIKVD |
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