Gene
| Gene Model ID | pfu_aug2.0_188.1_27004 |
|---|---|
| Locus | scaffold188.1 : 173029 ... 216710 : - |
| To GenomeBrowser | scaffold188.1:173029..216710 |
| Genes list of scaffold | scaffold188.1 |
| Synonym | pfu_aug1.0_80101.1_34913 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_188.1_27004.t1 | 1 | 1 | TFR_dimer | 189 | 245 | 1.6e-10 | 40.6 | 8.9e-14 | 4.4e-10 | 39.2 |
| pfu_aug2.0_188.1_27004.t1 | 2 | 1 | Exo_endo_phos_2 | 369 | 479 | 1.8e-12 | 46.9 | 1.1e-15 | 5.5e-12 | 45.3 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 1 | Lectin_C | 494 | 573 | 0.0 | 251.4 | 2.8e-07 | 0.0014 | 19.2 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 2 | Lectin_C | 604 | 725 | 0.0 | 251.4 | 3.6e-13 | 1.8e-09 | 38.1 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 3 | Lectin_C | 771 | 837 | 0.0 | 251.4 | 8.2e-12 | 4.1e-08 | 33.8 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 4 | Lectin_C | 869 | 975 | 0.0 | 251.4 | 3.2e-19 | 1.6e-15 | 57.6 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 5 | Lectin_C | 988 | 1011 | 0.0 | 251.4 | 0.51 | 2500.0 | -0.9 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 6 | Lectin_C | 1008 | 1065 | 0.0 | 251.4 | 0.0012 | 6.1 | 7.5 |
| pfu_aug2.0_188.1_27004.t1 | 2 | 2 | Exo_endo_phos_2 | 1071 | 1107 | 1.8e-12 | 46.9 | 0.58 | 2900.0 | -2.2 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 7 | Lectin_C | 1293 | 1404 | 0.0 | 251.4 | 6.4e-12 | 3.2e-08 | 34.1 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 8 | Lectin_C | 1435 | 1548 | 0.0 | 251.4 | 6.2e-16 | 3.1e-12 | 47.0 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 9 | Lectin_C | 1580 | 1614 | 0.0 | 251.4 | 0.00032 | 1.6 | 9.4 |
| pfu_aug2.0_188.1_27004.t1 | 10 | 10 | Lectin_C | 1670 | 1786 | 0.0 | 251.4 | 1.2e-12 | 5.8e-09 | 36.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_188.1_27004.t1 | gi|390346875|ref|XP_799285.3| | 8.0e-29 | |
| pfu_aug2.0_188.1_27004.t1 | gi|390346858|ref|XP_001179452.2| | PREDICTED: N-acetylated-alpha-linked acidic dipeptidase 2 [Strongylocentrotus purpuratus] | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_188.1_27004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27004.t1 atggcctggattcgtgacaaagtagtggcttatataaatgttgacagttctgtaacaggtaatttgcacacctatctcag gagcgttccattgctgaaaaaagtttttgtagaaagtacaaagatagctgcagatccaagtggacagtatgattcagtgt atgataagtggcttgacgaagagcacggggacattcaggccagaaaaatgggtggaggaagtgatttcgtaccatttctt gctgtgcatggaataccaaccatgtatccaaagatctatggcatttctaaaggaatcaacgggcaagagtggagggcaag aagcactcccctatatcatactcgctatgagacctaccatttcatgaaaatgatcgatccggaaatgaagaattttgctg ccatgacaactatccttactgacgttttacgacaattagcggattccatgatattaccgttcgatctgaaagcgtttctc atagatttgaaaaagtcagtcaaggttgttgttgatgttgtttttatacaaaacaccaaagtagacaagaaatatcaaga gggacttcaaaaaggtatcgagaatgtagatgaagccattgcaaagtttcagaatgatatagctgcagtcgataaaaata acccattagctgttcggagagtaaatgacaaaatgatggcacttgaaaaagtattcatagatggtaacgggctacctgat agacctcaatataagacagacagcaatccctacgatgttccacctaagaaaaaccttcgaattatgacggtaaactgtcg gagcgttaaagataaaaaagaggaacttcaaacagccatccactacctaaaaccagatatagtatgtggaacagagtcat ggctaaaaggagtaaaaccgggacaaaatccatctagagacgcaattaaatctagcgaaatattcccaccagaatataac gtatatagaaatgacagaggtacacttggaggaggtgtctttattcttgttgagaagtcgataacatctatcgaaaaacc agaatttataacagaaggagaaatacagtgggtgaaaatcaagatgaaaaacaacaaggacctactgattggctcatact atatgccacatagagaacagaaacacctagatgaacttaagaaatcactagatataatcgacctaaataacgtcacaaac aaaatattaactggagacttcaactgcccagacataaattggaacttacaaacagcaaaagggccagaaagggaaataca acaaggactcgcagacatcatgagtgcaaataatctcactcaaaatcatgaacatcccacaagagaggataaccttttgg acttggtctttgtttccaacccaagcttagtaaaatcgtccataaacgtaccaggcatatcagatcacgacattgtaata acagatatggatacaaagacataccttcaaacattggtatcaggatacaacaagttatcagatgggttttggactgacat gaccactctcagatttgatggaaccaaaagtagttctggtagatggatgtggggacagtacatccccgtggataattcta caattcaatgggagatgtatcctacaagctcacctgtagaaacatgtggtgctctcaacatacaggcggccatgacaaac tgggaatgcagcaagaaaatgggatttatttgtgaaatggacaatacagcctattccggttgtccatttggttggatgcc tacagataccacgtgttattacttcagtgatctgacagaccctacacaaaaactaacatggatgcaagccaaagcctatt gtgctaacatgcaactaccacctaacgtcactactccagcccaccttctcactatggataacaattatgattatgttggt actccatctttccgttttaattacatcctgtccgagatgccagaggtagcacaaaccaccgttatgttttggacaggact gacaagaactgggactcaatggggatggtttaataatgatagctacaatccatctttcattcaatgggcaaaggaaccgg acagcataaacaacaatgagaactgtgctataataaagacagacggtcatttctcggaccaagactgctcccaaaacttt aattacatttgtagagctacacagaatactgggacatcgacggtgggtgcggctagccaaacaggggatgtttactcatc tcagacacctgatcccacctttaggttgctagggaattacatcctgtccgagatgccagaggtagcacaaaccaccgtta tgttttggacaggactgacaagaactgggactcaatggggatggtttaataatgatagctacaatccatctttcattcaa tgggcaaaggaaccggacagcataaacaacaatgagaactgtgctataataaagacagacggtcatttctcggaccaaga ctgctcccaaaactttaattacatttgtagagctacacagaatactgataacactgactactacatgggttgcaagggtt ggtcccgggctggacataaatgcttcaaattctttgataatccaaagtcaacttgggcaacagcaaaagaacattgtcga gccgcaggaggcgatcttctcagagtagactccgtagatgaaaagcgttggatggaatggcaaatgtcaacaaatgacca cgccagttattactggactggacttaatgatcaggccgtggaggggaactttagatggactgatggatcacctgtgaaac aggcaaacatccgatggaattcagagcctaataattggtttggaaacgaggattgtgcagtcattttgaacgatgcagtt tggagtgacggcgaatgttcactaccaacaaactatatctgcgagtacatcaatccctcaggaggaaactgtccatcttc ttccggatggatatccaacacgaacagcggagagtgttattacttctcaccgtcaaatacaacgctgagttggttcgatg cgaacgcagcatgtcgtgattttgctttcagtaagaatactccgacgtcattactggcaataaacagtaaggaggaattg aactacatcacaaaggtactggccaatccttcgcaagtcgtactcaaaggatactggactgatctcatgatagaaaccat gaaggtaaacaaatatggccgtcgagggctcttattggctgacacattttcgacatctcctctgcaaccgcttcacagaa gttcacgaaaccttacaggaaataaatactcaaggtcctctacaacatttgcgtttttcgtgccgatcggtcaacaaata tggccgtcgagtgctctgattggccggcacattttggacttcttctctacaaccgctgcacagaatttcatgaaacctta caggaagcacgtacgcaaggtcatctaccaagtttgtgtttttcgtgccgatcagtcaacaaatatggctgtcgaaggct ctgattggctgatacattttcgacttctcctcttaaaccgctacacagaatttcacgaaactttacaggaagcaaatacc aaattgtccaccatcattcttttgtctccgactcagaacgctgtttacaagcccattactatagctatacgtcatacaat gacgtcatctgatctggagataacagagaatgatgacgtcataagtacaaattgtgcgaaagcttgtaacctgcaagctt acgtagaaatacattctaaagaaacttgtgatgctgctcaggataatttgggatgctcacccgggtgggtggcatggcaa ggaaactgttactttgtacagacgaaaaaattggtcacgagaaagaacgccaatattgactgtgctaacctttatggtac attactaagatctacaagttctgatgaaatgacataccttcaaacattggtatcaggatacaacaagttatcagatgggt tctggacagacatgaccactctcagatttgatggaaccaaaagtagttctggtagatggatgtggggacagtacatcccc gtggataattctacaatccaatgggagatgtatcccacaagctcacctgtagaaacatgtggtgctctaaacatacaggc ggccatgacaaactgggaatgcagcaagaaaatgggatttatttgtgaaatggataatactgcatattccggttgtccat ttggttggatgcctacagataccacgtgttattacttcagtgatctgacagaccctacacaaaaactaacatggatgcaa gccaaagcctattgtgctaacatgcagctaccacctaacgtcactactccagcccaccttctcactatggataacaacta tgattacaattacatcctatccgagatgccagaagtagcacaaaccaccgttatgttttggacaggactgacaaggactg ggactcaatggggatggtttaatggtgataattataacccaacttttattcaatgggcaaaggaaccggacaacattaac aacaatgagaactgtgctataataaagacagacggtcatttctcggaccaagactgctcccaaaactataattacatttg tagagcttcacagagtactgatgacactgattactacatggggtgccagggctggtcccgggctggacacaaatgcttta acttttttgatcagccaaagtcaacttgggcaaccgcaagacagaactgccaagctgcaggaggcgatcttctcagaata gattctgtggatgaaaagattttgcctcttgttgacttgcttgaaacgtcacctgaaaattcgatcaaaaatgatacaaa aatatttgcgaaatttgtaaaatctttaaaggtaattaaagcagaaggcaattgtccatcttcgcccggatgggtatcta acacgaacagcggagagtgttacttcttctcaccatccaatgcgaccctgagttggttcgaggcgaacacagcatgtcgt aattacgctttcagtaaatcgactccgacatcactgctggcagtgaacagtcaggaggaattggactacattgcaagcgt gttagccattccgaccaactttgctctaaaaggatactggactgatctcaatgatagaaaccatgaaggtacctggtcat acacagatggctttaacaacccgccaaatatgaacctcgtacaatggaatgctgagccgaaagatgtaaatggaactgag gactgtggactacttggatttggtgctaggtattttgaaagtaaatgcggtacaaaagctggatttatttgctacaagta tcctattgttagaaaggactctaccacactaccaacttctccttga |
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Protein
| Protein ID | pfu_aug2.0_188.1_27004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27004.t1 MAWIRDKVVAYINVDSSVTGNLHTYLRSVPLLKKVFVESTKIAADPSGQYDSVYDKWLDEEHGDIQARKMGGGSDFVPFL AVHGIPTMYPKIYGISKGINGQEWRARSTPLYHTRYETYHFMKMIDPEMKNFAAMTTILTDVLRQLADSMILPFDLKAFL IDLKKSVKVVVDVVFIQNTKVDKKYQEGLQKGIENVDEAIAKFQNDIAAVDKNNPLAVRRVNDKMMALEKVFIDGNGLPD RPQYKTDSNPYDVPPKKNLRIMTVNCRSVKDKKEELQTAIHYLKPDIVCGTESWLKGVKPGQNPSRDAIKSSEIFPPEYN VYRNDRGTLGGGVFILVEKSITSIEKPEFITEGEIQWVKIKMKNNKDLLIGSYYMPHREQKHLDELKKSLDIIDLNNVTN KILTGDFNCPDINWNLQTAKGPEREIQQGLADIMSANNLTQNHEHPTREDNLLDLVFVSNPSLVKSSINVPGISDHDIVI TDMDTKTYLQTLVSGYNKLSDGFWTDMTTLRFDGTKSSSGRWMWGQYIPVDNSTIQWEMYPTSSPVETCGALNIQAAMTN WECSKKMGFICEMDNTAYSGCPFGWMPTDTTCYYFSDLTDPTQKLTWMQAKAYCANMQLPPNVTTPAHLLTMDNNYDYVG TPSFRFNYILSEMPEVAQTTVMFWTGLTRTGTQWGWFNNDSYNPSFIQWAKEPDSINNNENCAIIKTDGHFSDQDCSQNF NYICRATQNTGTSTVGAASQTGDVYSSQTPDPTFRLLGNYILSEMPEVAQTTVMFWTGLTRTGTQWGWFNNDSYNPSFIQ WAKEPDSINNNENCAIIKTDGHFSDQDCSQNFNYICRATQNTDNTDYYMGCKGWSRAGHKCFKFFDNPKSTWATAKEHCR AAGGDLLRVDSVDEKRWMEWQMSTNDHASYYWTGLNDQAVEGNFRWTDGSPVKQANIRWNSEPNNWFGNEDCAVILNDAV WSDGECSLPTNYICEYINPSGGNCPSSSGWISNTNSGECYYFSPSNTTLSWFDANAACRDFAFSKNTPTSLLAINSKEEL NYITKVLANPSQVVLKGYWTDLMIETMKVNKYGRRGLLLADTFSTSPLQPLHRSSRNLTGNKYSRSSTTFAFFVPIGQQI WPSSALIGRHILDFFSTTAAQNFMKPYRKHVRKVIYQVCVFRADQSTNMAVEGSDWLIHFRLLLLNRYTEFHETLQEANT KLSTIILLSPTQNAVYKPITIAIRHTMTSSDLEITENDDVISTNCAKACNLQAYVEIHSKETCDAAQDNLGCSPGWVAWQ GNCYFVQTKKLVTRKNANIDCANLYGTLLRSTSSDEMTYLQTLVSGYNKLSDGFWTDMTTLRFDGTKSSSGRWMWGQYIP VDNSTIQWEMYPTSSPVETCGALNIQAAMTNWECSKKMGFICEMDNTAYSGCPFGWMPTDTTCYYFSDLTDPTQKLTWMQ AKAYCANMQLPPNVTTPAHLLTMDNNYDYNYILSEMPEVAQTTVMFWTGLTRTGTQWGWFNGDNYNPTFIQWAKEPDNIN NNENCAIIKTDGHFSDQDCSQNYNYICRASQSTDDTDYYMGCQGWSRAGHKCFNFFDQPKSTWATARQNCQAAGGDLLRI DSVDEKILPLVDLLETSPENSIKNDTKIFAKFVKSLKVIKAEGNCPSSPGWVSNTNSGECYFFSPSNATLSWFEANTACR NYAFSKSTPTSLLAVNSQEELDYIASVLAIPTNFALKGYWTDLNDRNHEGTWSYTDGFNNPPNMNLVQWNAEPKDVNGTE DCGLLGFGARYFESKCGTKAGFICYKYPIVRKDSTTLPTSP |
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