Gene
| Gene Model ID | pfu_aug2.0_188.1_27015 |
|---|---|
| Locus | scaffold188.1 : 392985 ... 401227 : + |
| To GenomeBrowser | scaffold188.1:392985..401227 |
| Genes list of scaffold | scaffold188.1 |
| Synonym | pfu_aug1.0_11829.1_03134 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_188.1_27015.t1 | 1 | 1 | DUF2431 | 58 | 225 | 4.1e-37 | 127.7 | 2.0e-40 | 5.8e-37 | 127.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_188.1_27015.t1 | gi|676447406|ref|XP_009051397.1| | hypothetical protein LOTGIDRAFT_152624 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_188.1_27015.t1 | gi|524873777|ref|XP_005093631.1| | PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_188.1_27015.t1 | gi|512853850|ref|XP_004916163.1| | PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X1 [Xenopus (Silurana) tropicalis] | 7.9874e-44 |
| pfu_aug2.0_188.1_27015.t1 | gi|410915768|ref|XP_003971359.1| | 2.00386e-43 | |
| pfu_aug2.0_188.1_27015.t1 | gi|746860867|ref|XP_011061296.1| | PREDICTED: ferredoxin-fold anticodon-binding domain-containing protein 1 isoform X2 [Acromyrmex echinatior] | 5.00264e-43 |
Transcript
| Transcript ID | pfu_aug2.0_188.1_27015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27015.t1 atgaccttgaacctaggtcttagatcaaaggtcaaggtcacaatcaacatcatggtcaaaaccttgtacggggcattact ccatcccttgttgatggattgcagtaatatgtcacagaaatgtttcttagaacttaaggaggtgatggagagaccattag atgggagtttactacttgtaggagaaggagacttttcgctgtctgttgccttggtatgtcacctgactgagaatgaccaa tcactcaatatccctgtgattgcttcgagcatcgagtcagaagagactattcttaaacacaagaatgctcaggagaatat agcatggcttcaagaaaaaggggtcataattcatttgaacacagatgctactgttttgcaccagaatgctctacttaaag atgtcagattcaggcgaattgttttcaactttccccatgccggtggcaagtccaatcataagaagaatcgcaaacttctg aacgacttcttttcaagtgcatcaaaagtccttgacaaggaaggtcaaatcatggtgaccttgtgtaaaggtcaaggtgg cacacctgcagataaaccaatgagaaaatggcatgacagctggcaggtggtttccatggcagccaatgcaggcctgaaac ttacagaagtcttaaactttgatgctcataagttttttacaatacaaatccacaggcttcagaagtcaagacaaagggtt tcatacagaaggggcaataactcatgtatttga |
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Protein
| Protein ID | pfu_aug2.0_188.1_27015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_188.1_27015.t1 MTLNLGLRSKVKVTINIMVKTLYGALLHPLLMDCSNMSQKCFLELKEVMERPLDGSLLLVGEGDFSLSVALVCHLTENDQ SLNIPVIASSIESEETILKHKNAQENIAWLQEKGVIIHLNTDATVLHQNALLKDVRFRRIVFNFPHAGGKSNHKKNRKLL NDFFSSASKVLDKEGQIMVTLCKGQGGTPADKPMRKWHDSWQVVSMAANAGLKLTEVLNFDAHKFFTIQIHRLQKSRQRV SYRRGNNSCI |
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