Gene
| Gene Model ID | pfu_aug2.0_1882.1_08625 |
|---|---|
| Locus | scaffold1882.1 : 47306 ... 59688 : + |
| To GenomeBrowser | scaffold1882.1:47306..59688 |
| Genes list of scaffold | scaffold1882.1 |
| Synonym | pfu_aug1.0_12163.1_68457 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lim domain-binding protein 2-like isoform x6 | GO:0003712 GO:0005634 GO:0030274 GO:1903506 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1882.1_08625.t1 | 1 | 1 | LIM_bind | 30 | 232 | 0.0 | 223.1 | 0.0 | 0.0 | 221.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1882.1_08625.t1 | gi|676494000|ref|XP_009066419.1| | hypothetical protein LOTGIDRAFT_184392 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1882.1_08625.t1 | gi|524890416|ref|XP_005101755.1| | PREDICTED: LIM domain-binding protein 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1882.1_08625.t1 | gi|524890424|ref|XP_005101759.1| | PREDICTED: LIM domain-binding protein 2-like isoform X5 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1882.1_08625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1882.1_08625.t1 atgccttctgggcagcctatgtccagtccaatggtggacagggatcacggcatagcgagacacaccccctatatgggtca gcctgactacaggattcatgaactcaacaagcggctacagcagagaagtgaggaaagtgacaatctatggtgggatgcct ttgccacagagttctttgaagatgatgctacgctgaccctctcgttctacctcgaagatggcccgaaacgatatactatt ggtcgaacattaatcccacgatacttcaggagtatatttgaaggcggggtgacagatctgtactatatattgaagcacag taaagagtcctttcacaacacatctatcacgctggactgtgaccaagcaaccatggtaacacaccatggtaaacctatgt tcacaaaagtagtaacagaagggcgtttgatcttagaatttacgtttgatgacctgatgaggatcagatcgtggcatttc caagtacggcagcaccgagagctcataccacgcagtgttattgccatgcagcaagatccctctatgatggaacagttatc aaagaacattactcgccaaggcctcacaaactacactctcaactttctcaggctttgtgtaatcctagagcccatgcagg agctgatgtcacgacacaaggcgtacggacttaaccctcgggattgtctgaaaacgacattgttccagaagtggcaaaga atggtggctccacctggaaaggggaaaccagaaacagtgagacagcagggtaagagaagaaagaggaagtcctcagcggg caatgctggtaatatggctgtaggtgctcctgctgggaaaaagagatctcctgggccacagggaatgcccacctcagtac caggggatgtgatggtggtaggggagccaactctaanaatgatgttaaaaactcgttcgattatttctgatgttgtctct gtaaatgtttcccacaaacctccgttatag |
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Protein
| Protein ID | pfu_aug2.0_1882.1_08625.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1882.1_08625.t1 MPSGQPMSSPMVDRDHGIARHTPYMGQPDYRIHELNKRLQQRSEESDNLWWDAFATEFFEDDATLTLSFYLEDGPKRYTI GRTLIPRYFRSIFEGGVTDLYYILKHSKESFHNTSITLDCDQATMVTHHGKPMFTKVVTEGRLILEFTFDDLMRIRSWHF QVRQHRELIPRSVIAMQQDPSMMEQLSKNITRQGLTNYTLNFLRLCVILEPMQELMSRHKAYGLNPRDCLKTTLFQKWQR MVAPPGKGKPETVRQQGKRRKRKSSAGNAGNMAVGAPAGKKRSPGPQGMPTSVPGDVMVVGEPTLXMMLKTRSIISDVVS VNVSHKPPL |
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