Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1882.1_08629
Locus scaffold1882.1 : 116676 ... 126892 : +
To GenomeBrowser scaffold1882.1:116676..126892
Genes list of scaffold scaffold1882.1
Synonym pfu_aug1.0_4143.1_37811

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1882.1_08629.t1 gi|470635200|ref|XP_004323129.1| PREDICTED: protein SERAC1 [Tursiops truncatus] 0.0
pfu_aug2.0_1882.1_08629.t1 gi|719796263|ref|XP_010224765.1| PREDICTED: protein SERAC1 [Tinamus guttatus] 0.0
pfu_aug2.0_1882.1_08629.t1 gi|543733431|ref|XP_005507729.1| PREDICTED: protein SERAC1 [Columba livia] 0.0
pfu_aug2.0_1882.1_08629.t1 gi|514771758|ref|XP_005025708.1| PREDICTED: protein SERAC1 isoform X3 [Anas platyrhynchos] 0.0
pfu_aug2.0_1882.1_08629.t1 gi|514771754|ref|XP_005025707.1| PREDICTED: protein SERAC1 isoform X2 [Anas platyrhynchos] 0.0

Transcript
Transcript IDpfu_aug2.0_1882.1_08629.t1
Definition-
>pfu_aug2.0_1882.1_08629.t1
atgaacgatgcaatggtatcattggctcaacactggccttttgtggaggttcaagattcgtcgtccaaacttaagaagct
gaagtccaaagtaacagaattaaaagtaaaatatttgtcagtattgagatccaagaaggaagatccatggtcacttttag
aaatgacaaaatcaaaaaatcccgtcaacagggaaatagctatcagagaacttagcaagcagtcacaatggtcagaccat
cagtaccgctacattgcccagatgtgtgatgcacagactttggttggcttggccagatctaaggacgtggataacagatt
ttttcctccccttccccagctgaaaccaccggaagaaaatctgtcagcatttgggggaactggaatggagtttactcgtt
cagtcagtcgcagaccagaagaaaaagcagaaatcaattgtttagaagtattagaaaatcattctaaggatgcccatcat
tgccatcagatagttacactaggtggacttcagctactgttacacgcctataaccagaggaagaatagtattgtagtgtg
caggaacatcgctagaatcataggaaatctggcagtacaccaagatctacataaagaaatactaagagctggttgggtga
ctgtgttgggaaggtggattaattcttctgacctaaccctttctctacatgctgctagagctctatataacttagacagg
gagtataatagtacagtgttacaagatggagtctacataatcagtcctctatacagaagtagaaaaccactcagtgttga
tatagtatttattcatggtttacgaggagggccgttcaagacgtggagacagcaggaccgcaaagcttctgatcctggtc
acatatctgatggtacagagagtgttacaaagggaacttatacattctgctggcctaagttagatattcattcttttcac
tatttcaggaggacgttgaagagtcgtgcctctgcacttgttcagaaacttgaggaagcagggctaggatccagacctat
tatctggataggtcattcaatgggag

Protein
Protein IDpfu_aug2.0_1882.1_08629.t1
Definition-
>pfu_aug2.0_1882.1_08629.t1
MNDAMVSLAQHWPFVEVQDSSSKLKKLKSKVTELKVKYLSVLRSKKEDPWSLLEMTKSKNPVNREIAIRELSKQSQWSDH
QYRYIAQMCDAQTLVGLARSKDVDNRFFPPLPQLKPPEENLSAFGGTGMEFTRSVSRRPEEKAEINCLEVLENHSKDAHH
CHQIVTLGGLQLLLHAYNQRKNSIVVCRNIARIIGNLAVHQDLHKEILRAGWVTVLGRWINSSDLTLSLHAARALYNLDR
EYNSTVLQDGVYIISPLYRSRKPLSVDIVFIHGLRGGPFKTWRQQDRKASDPGHISDGTESVTKGTYTFCWPKLDIHSFH
YFRRTLKSRASALVQKLEEAGLGSRPIIWIGHSMG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495