Gene
| Gene Model ID | pfu_aug2.0_189.1_30376 |
|---|---|
| Locus | scaffold189.1 : 80112 ... 84265 : - |
| To GenomeBrowser | scaffold189.1:80112..84265 |
| Genes list of scaffold | scaffold189.1 |
| Synonym | pfu_aug1.0_17048.1_11005 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_189.1_30376.t1 | 1 | 1 | Ependymin | 75 | 196 | 1.1e-06 | 28.4 | 1.0e-10 | 1.5e-06 | 27.9 |
Transcript
| Transcript ID | pfu_aug2.0_189.1_30376.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30376.t1 atgtggaagttaattttgcccctcttacccctcctctgtcgggcggaccccaccccttgctgtaccggacaccagtttca agctgctcttcacgaaatagggggatacattgacccaaaaagcggcgtaccaacaccaacagattatgaagctcagatct actatgactatgatgtaaagatgctgagatctgaccgctcagtgcgcaacgacgatggcacagtggacacaacgaaggtc atcatggactacaaacatcacaaacaatacattgtaacaactagttcatgccaatcatttcccctggttgatgaaatgac tccaccctgtgttccagctaattccacatacacgggcaggcagatgtttggttctggtaaaaacgctgtattcggtgaca gctacaggatcgatttgatggcaactaaaaatatcaccatgaagataagtgtgtctacggacgactgtactccactctat cagtctgtctacggcgcccctgggggagttatctccgaggtttcgtattacttcacaaatgtccaaaggaaacttccttc agacgcattcaatataccacctaattgtcacatgcaaggctaa |
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Protein
| Protein ID | pfu_aug2.0_189.1_30376.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30376.t1 MWKLILPLLPLLCRADPTPCCTGHQFQAALHEIGGYIDPKSGVPTPTDYEAQIYYDYDVKMLRSDRSVRNDDGTVDTTKV IMDYKHHKQYIVTTSSCQSFPLVDEMTPPCVPANSTYTGRQMFGSGKNAVFGDSYRIDLMATKNITMKISVSTDDCTPLY QSVYGAPGGVISEVSYYFTNVQRKLPSDAFNIPPNCHMQG |
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