Gene
| Gene Model ID | pfu_aug2.0_189.1_30379 |
|---|---|
| Locus | scaffold189.1 : 116926 ... 122835 : + |
| To GenomeBrowser | scaffold189.1:116926..122835 |
| Genes list of scaffold | scaffold189.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_189.1_30379.t1 | 1 | 1 | Synaptobrevin | 7 | 93 | 4.8e-27 | 93.3 | 1.4e-29 | 5.5e-27 | 93.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_189.1_30379.t1 | gi|632943820|ref|XP_007887163.1| | PREDICTED: vesicle-associated membrane protein 8-like isoform X3 [Callorhinchus milii] | 2.0e-21 |
| pfu_aug2.0_189.1_30379.t1 | gi|556975051|ref|XP_005995240.1| | PREDICTED: vesicle-associated membrane protein 8 [Latimeria chalumnae] | 5.0e-16 |
| pfu_aug2.0_189.1_30379.t1 | gi|734618809|ref|XP_010737174.1| | PREDICTED: vesicle-associated membrane protein 5-like [Larimichthys crocea] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_189.1_30379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30379.t1 atggatgtaagacagaatgatgatgggattgagagattgcaacaggaagtggaggaggttggggctgtcatgaagaataa cataaacaaggtggtagagcgaggagataaactacatgacttacaaactagagctgaggatctggaaatggcggcaggag agtttcaaggaactacgactaagattcgaaagaaaacacaatggaagaacaggaaaatgacaatcattattgtagccata gttatggtggtgatcattgtcataatactaatcatactagcggcaactggtacaatataa |
|
Protein
| Protein ID | pfu_aug2.0_189.1_30379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30379.t1 MDVRQNDDGIERLQQEVEEVGAVMKNNINKVVERGDKLHDLQTRAEDLEMAAGEFQGTTTKIRKKTQWKNRKMTIIIVAI VMVVIIVIILIILAATGTI |
|