Gene
| Gene Model ID | pfu_aug2.0_189.1_30383 |
|---|---|
| Locus | scaffold189.1 : 274718 ... 282450 : - |
| To GenomeBrowser | scaffold189.1:274718..282450 |
| Genes list of scaffold | scaffold189.1 |
| Synonym | pfu_aug1.0_1836.1_66110 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_189.1_30383.t1 | 1 | 1 | Neur_chan_LBD | 29 | 178 | 9.0e-38 | 129.5 | 1.6e-41 | 1.2e-37 | 129.1 |
| pfu_aug2.0_189.1_30383.t1 | 2 | 1 | Neur_chan_memb | 204 | 292 | 4.2e-38 | 131.5 | 7.6e-37 | 5.6e-33 | 114.7 |
| pfu_aug2.0_189.1_30383.t1 | 2 | 2 | Neur_chan_memb | 309 | 334 | 4.2e-38 | 131.5 | 9.1e-08 | 0.00067 | 19.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_189.1_30383.t1 | gi|704515219|ref|XP_010081615.1| | PREDICTED: glycine receptor subunit alpha-4 [Pterocles gutturalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_189.1_30383.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30383.t1 atgaaggaacgctatgtttttatgattctgaacattttgattggttatcaatctgcggatgcatccaacgactataccag acgagaactggccgagtccttactaaatgcaagcacgtatgattacggtacagccccggatgctgacaaaaatgctccga cagaagttaccatccagttatatattcttgcgctagattcactaaatgaaattacaatggattattccattcatctatac ttacgtcaatcatggaatgacagacgattggatttcgggaaccacactaattcatttgacagactagagcttagtcagaa ggttatagacaaagcatggataccagacacttactttgtggatgagaaaaacgccgttctacatgacgtcactataccaa acagactcatgcatatttatagaaatggaaccgttatgtacagtatgagaatttccatgaagctctcttgtgactttcag ctgagccactatcccttcgatgtgcaaatatgtcctataactatggaaagttgaggaaagttctcgtgtctagaaggaaa gctccatttcatacgtcgcagcggatattacgtcatacagatcttcggtccaagcattctcatcgtcatgttgtcctggg tatccttctggttggaccctgaggcatccccagctaggatttcattgggtatattgagcgttctcaacatgacgacggcc agtaacagcgctcgttcctccttacctaaggtttcctatgtgaaagctattgacgtctggatggcgacttgtttattctt tgtttttgcagccctgattcactttgcgttcgtcaacgttttagcaagaagacaaaaaagaagaatgtctgaaaagaaaa cagatgctcctcccgagccaggtggacctatgatagacttgcgaaaaagagccatacaaatagacaaaatagccaggatt gttttcccgtcttgttttgtagttttcaatataggattttggatccactacattgccattggtttacattaa |
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Protein
| Protein ID | pfu_aug2.0_189.1_30383.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30383.t1 MKERYVFMILNILIGYQSADASNDYTRRELAESLLNASTYDYGTAPDADKNAPTEVTIQLYILALDSLNEITMDYSIHLY LRQSWNDRRLDFGNHTNSFDRLELSQKVIDKAWIPDTYFVDEKNAVLHDVTIPNRLMHIYRNGTVMYSMRISMKLSCDFQ LSHYPFDVQICPITMESXGKFSCLEGKLHFIRRSGYYVIQIFGPSILIVMLSWVSFWLDPEASPARISLGILSVLNMTTA SNSARSSLPKVSYVKAIDVWMATCLFFVFAALIHFAFVNVLARRQKRRMSEKKTDAPPEPGGPMIDLRKRAIQIDKIARI VFPSCFVVFNIGFWIHYIAIGLH |
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