Gene
| Gene Model ID | pfu_aug2.0_189.1_30384 |
|---|---|
| Locus | scaffold189.1 : 285226 ... 311722 : - |
| To GenomeBrowser | scaffold189.1:285226..311722 |
| Genes list of scaffold | scaffold189.1 |
| Synonym | pfu_aug1.0_1836.1_66109 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_189.1_30384.t2 | 1 | 1 | SNF | 113 | 580 | 0.0 | 603.1 | 0.0 | 0.0 | 602.2 |
Transcript
| Transcript ID | pfu_aug2.0_189.1_30384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30384.t1 atgagctctgacaaggcaaaggaagctgcggggtccggggatcccgtgagcacccaagacattgaaattgaggaggacca tgaaaaaggggtacataagagggagacgtggtccaggaaaatagacttcttacttgcttgtgttggattttctgtcggac tcggaaatgtatggagatttccatatctatgttacaaaaatggaggaggagcttttcttatcccgtatttcttattggtt ctcatcggaggaatccccctcttttatctggaggtcgccgtggggcagtttatgggcgttgccggatacaaagcatggag gatatgtcccttattccaaggtattggtatatcttccaccatcgttgtgttcttcctgaactgttactacaatgttattc tgtgctgggcgttttactacatgttcagttcgttcaccctggaactgccctgggcgacgtgcgggaactggtggaacaca gagaactgtactgatttcagccagcctgatccctatccgggcctgaatacgacgtgtacaaatagagtggtcgttatcaa caggccaaatgcgaccgctcctgaaataaccaatacaagctgtattccaaaggattttcaacttgattctgtcacggaat tctgggaaaataaagtactggctatttctgacggaatagaacctgacaacatgggtacacctaaatgggacttggccttg acactgttatttgcttggatcgttgtttatgcatgtatctgcaagggcatcaaatcatcaggaaaggtcatgtacatcac agctacttcaccctatctcttcatgttggctcttttaataaggaattctatattacccggagccagagacggagtggaat tctatctgaaaccgaatctgacaaaattggctgacatggaggtctgggtagatgcagggacacagattttcttctcctat tccatatcactgggcgcccttactgcccttgggagttacaacgtttttaatgccaattcttatagggatgcaatcatatt tgcctgcaccaatagcggcacgagtttcttcgcaggcttcctcatcttcactattctaggtcacatggcccatgaacaaa atataccaatcaaagacgtagctgctgggggccccggattagcgttcatagcttaccctaaagccgtatcgatcatgccc ggagccccaatatggtccgtattattcttcttaatggtcgtgctactcgggctagactcgcagtttgtgggcgtggaggg tgtcataacagccgtcgttgaccagtggccaacttatataaggagaggatatcggaaggaaattttcatcggtatcgttt gcgtcatcaacttcttcatagggctttcaatggtctgtccgggtggaatgtacgtcttccagctgtttgattactactcg ggcagtaaaattattctatttatagcattctttgaatgcatagctatagcatattgctatgcttataaatag |
|
| Transcript ID | pfu_aug2.0_189.1_30384.t2 |
| Definition | - |
>pfu_aug2.0_189.1_30384.t2 atgatatctcgttccttcgttcccaagaacacacaaccagaaaatacacaaccagagaaaatacaaccagagaacacaca accagagaaaacacaacaaaagaacacacaaccagaaaatccaaatccaaaagaaaacacaaacaggataaccacaaata aaaaaaatcatgacgaacaacacatagaagatgggagaacaattgcctgggaattttacgaaccaaccggagggaccatg agctctgacaaggcaaaggaagctgcggggtccggggatcccgtgagcacccaagacattgaaattgaggaggaccatga aaaaggggtacataagagggagacgtggtccaggaaaatagacttcttacttgcttgtgttggattttctgtcggactcg gaaatgtatggagatttccatatctatgttacaaaaatggaggaggagcttttcttatcccgtatttcttattggttctc atcggaggaatccccctcttttatctggaggtcgccgtggggcagtttatgggcgttgccggatacaaagcatggaggat atgtcccttattccaaggtattggtatatcttccaccatcgttgtgttcttcctgaactgttactacaatgttattctgt gctgggcgttttactacatgttcagttcgttcaccctggaactgccctgggcgacgtgcgggaactggtggaacacagag aactgtactgatttcagccagcctgatccctatccgggcctgaatacgacgtgtacaaatagagtggtcgttatcaacag gccaaatgcgaccgctcctgaaataaccaatacaagctgtattccaaaggattttcaacttgattctgtcacggaattct gggaaaataaagtactggctatttctgacggaatagaacctgacaacatgggtacacctaaatgggacttggccttgaca ctgttatttgcttggatcgttgtttatgcatgtatctgcaagggcatcaaatcatcaggaaaggtcatgtacatcacagc tacttcaccctatctcttcatgttggctcttttaataaggaattctatattacccggagccagagacggagtggaattct atctgaaaccgaatctgacaaaattggctgacatggaggtctgggtagatgcagggacacagattttcttctcctattcc atatcactgggcgcccttactgcccttgggagttacaacgtttttaatgccaattcttatagggatgcaatcatatttgc ctgcaccaatagcggcacgagtttcttcgcaggcttcctcatcttcactattctaggtcacatggcccatgaacaaaata taccaatcaaagacgtagctgctgggggccccggattagcgttcatagcttaccctaaagccgtatcgatcatgcccgga gccccaatatggtccgtattattcttcttaatggtcgtgctactcgggctagactcgcagtttgtgggcgtggagggtgt cataacagccgtcgttgaccagtggccaacttatataaggagaggatatcggaaggaaattttcatcggtatcgtttgcg tcatcaacttcttcatagggctttcaatggtctgtccgggtggaatgtacgtcttccagctgtttgattactactcgggc agtaaaattattctatttatagcattctttgaatgcatagctatagcatattgctatgcttataaatag |
|
Protein
| Protein ID | pfu_aug2.0_189.1_30384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30384.t1 MSSDKAKEAAGSGDPVSTQDIEIEEDHEKGVHKRETWSRKIDFLLACVGFSVGLGNVWRFPYLCYKNGGGAFLIPYFLLV LIGGIPLFYLEVAVGQFMGVAGYKAWRICPLFQGIGISSTIVVFFLNCYYNVILCWAFYYMFSSFTLELPWATCGNWWNT ENCTDFSQPDPYPGLNTTCTNRVVVINRPNATAPEITNTSCIPKDFQLDSVTEFWENKVLAISDGIEPDNMGTPKWDLAL TLLFAWIVVYACICKGIKSSGKVMYITATSPYLFMLALLIRNSILPGARDGVEFYLKPNLTKLADMEVWVDAGTQIFFSY SISLGALTALGSYNVFNANSYRDAIIFACTNSGTSFFAGFLIFTILGHMAHEQNIPIKDVAAGGPGLAFIAYPKAVSIMP GAPIWSVLFFLMVVLLGLDSQFVGVEGVITAVVDQWPTYIRRGYRKEIFIGIVCVINFFIGLSMVCPGGMYVFQLFDYYS GSKIILFIAFFECIAIAYCYAYK |
|
| Protein ID | pfu_aug2.0_189.1_30384.t2 |
| Definition | - |
>pfu_aug2.0_189.1_30384.t2 MISRSFVPKNTQPENTQPEKIQPENTQPEKTQQKNTQPENPNPKENTNRITTNKKNHDEQHIEDGRTIAWEFYEPTGGTM SSDKAKEAAGSGDPVSTQDIEIEEDHEKGVHKRETWSRKIDFLLACVGFSVGLGNVWRFPYLCYKNGGGAFLIPYFLLVL IGGIPLFYLEVAVGQFMGVAGYKAWRICPLFQGIGISSTIVVFFLNCYYNVILCWAFYYMFSSFTLELPWATCGNWWNTE NCTDFSQPDPYPGLNTTCTNRVVVINRPNATAPEITNTSCIPKDFQLDSVTEFWENKVLAISDGIEPDNMGTPKWDLALT LLFAWIVVYACICKGIKSSGKVMYITATSPYLFMLALLIRNSILPGARDGVEFYLKPNLTKLADMEVWVDAGTQIFFSYS ISLGALTALGSYNVFNANSYRDAIIFACTNSGTSFFAGFLIFTILGHMAHEQNIPIKDVAAGGPGLAFIAYPKAVSIMPG APIWSVLFFLMVVLLGLDSQFVGVEGVITAVVDQWPTYIRRGYRKEIFIGIVCVINFFIGLSMVCPGGMYVFQLFDYYSG SKIILFIAFFECIAIAYCYAYK |
|