Gene
| Gene Model ID | pfu_aug2.0_189.1_30389 |
|---|---|
| Locus | scaffold189.1 : 380323 ... 390660 : - |
| To GenomeBrowser | scaffold189.1:380323..390660 |
| Genes list of scaffold | scaffold189.1 |
| Synonym | pfu_aug1.0_7360.1_67680 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_189.1_30389.t1 | 1 | 1 | Patched | 62 | 845 | 0.0 | 445.5 | 0.0 | 0.0 | 445.2 |
| pfu_aug2.0_189.1_30389.t1 | 3 | 1 | Sterol-sensing | 293 | 447 | 6.3e-35 | 119.9 | 1.3e-38 | 6.3e-35 | 119.9 |
| pfu_aug2.0_189.1_30389.t1 | 3 | 2 | Sterol-sensing | 687 | 732 | 6.3e-35 | 119.9 | 0.46 | 2300.0 | -2.1 |
| pfu_aug2.0_189.1_30389.t1 | 3 | 3 | Sterol-sensing | 718 | 852 | 6.3e-35 | 119.9 | 0.002 | 9.9 | 5.6 |
Transcript
| Transcript ID | pfu_aug2.0_189.1_30389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30389.t1 atgggggaagaaacaaagaaaaaaggctgccactacaaatacgagaatgccatcggaaacgtattcgggcgatacggacg attcgtggcgagcggacccaagattccctggattatcttgtcgatatgtaccgtaataaacatcggtttgggactcggga tgctgaccataaagtcgatctccgactcggaaacactctatacgccgcaaaatagccaagcatccaaagacagaactacc ttaaaaggcctgttctctgactacagcggaaacaatttctattcttacagtattacggacttcaactatttcggggaggt attgataaaaaccaagaacgatgtgaacattttgacgtcatcatttatgacggaaataaagagtattgacgcgcagataa gggcggtcgttgcttccgattccggtgtatcgttcaattatagcgatgtttgtgctcttcgcgcaggcgcatgtgttgtt tccggagaggttgtgttgtcgacagcatttgaaacggcaatgctagctaacaacatcgattacccggtatttaacggcga atccattgcaggtacattcggcggcttacagacttccggggggaagctgacgtcatcttatgtcgtaaaacttgtttata atttacggacggatacggctgcctacgagagcaaatcgttggcgtgggagaaagcttttattacggcgatggagtcaatt tcttcggcaaatacagaacttgcttaccaatcgtccgactcggtaaactcggccttagatgagagcaccgccggagacat aaagtttttcagtgttacatttaccttaatgattacgtacgcttgctgtgctggaatagcagtcaatttgaattgtgtag cttggcgtgcaaatcttgcaatggcgggagtttttgcagcctgtcttgccattttatcatcttttggtttcatcagtcta tgtaccgtggagtttgtcaacattgtaggggtgatgccttttcttataataggtattggtattgacgacgtcttcatctt gctgtccggaattgccgatgctgtggacattaaggacgggccaggaaagacggtcattgagaacaaaatgttttttgctc tgaagcacagtggagtcgccattactattacctccattacagatttcctggcgtttgccatcggagcatcctctaccttt atcagcgttcggaacttctgtctgtatacaggttttgccgtgtttttctgttatctgaaccagcttttcttcttcgtacc atgtattgtcatcaacgagagacgagttgaggctaacaggcatttcatgtcttgtatgaaaacaagatcgaaagaggaac tcaagaaagatggaaaaagtcgtggccatattttttgttgtgccggtgaacagccaaaagatcgaaatgattacgatagc tacatggaaaaatatccaaaaatgctctttcaaaaaatcgtcaaacctctgccctgcaagataattattctcgtctgctt tgctggttatctagccgcgtcgatatacggtgcagttaacctgaaacagggcttagaactgagaaatctcgcagcagacg actcttacttctacaaatacgacacatggaatagagattacatgccgagtcaggtccctatcagtttcattataaaatcc cgccagacatactccgcacagacgacacaggactcgatcagcgcgatgttgacagcagccaagcaggacgccgatattga tgacaatattgaaattaattggttgactgcgtttcaagccgatgcctcctacacgacaacctcggagtccgcgtttgttt cagcgctggtgaccttcatccagtcaaacacaaagtatgagaacgacgtactttttgattctacaaacacccacatagat gcttcgcgattctacgtgtttacagtcgatctgaaagattcacaaaagcaagggaaaatgatgcaacgcatgcgcgatat agcaaacaacaatgccttgccagcttttccatttcacccctcctttattttcttcgagcagttcgtcacaattctctcgg ctacactgcagacgatcggaattgcagttgccgccatgacagttattacgataatatttatgccatatcccgttctcgta atttttgtgatggtaactatgatgatgattttgatcggcatttttggattcatgcattattgggaccttactcttagctc ggttactatgattcaacttgtcatgactgttggattctcggtcgacttcagtgcgcatatctgtcatggcttcatttccg tttccggtagctccaaagaagatcgggttcataaagcattggatcgaacaggaggggccgtaattaacgctgctttttca tcaattttaggtattatgatgctgttggcgtcatcagggtatattttccgtacattcttcaagcttatgttccttgtcat gctttttggacttttgcattccgttttattcctgccagttgttctatctcttatcggtccgagaccggcagaacacacgc aggtatgcaagggaataaaacaaactacgaatcaaacattacaaacgaaaaagcagtga |
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Protein
| Protein ID | pfu_aug2.0_189.1_30389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_189.1_30389.t1 MGEETKKKGCHYKYENAIGNVFGRYGRFVASGPKIPWIILSICTVINIGLGLGMLTIKSISDSETLYTPQNSQASKDRTT LKGLFSDYSGNNFYSYSITDFNYFGEVLIKTKNDVNILTSSFMTEIKSIDAQIRAVVASDSGVSFNYSDVCALRAGACVV SGEVVLSTAFETAMLANNIDYPVFNGESIAGTFGGLQTSGGKLTSSYVVKLVYNLRTDTAAYESKSLAWEKAFITAMESI SSANTELAYQSSDSVNSALDESTAGDIKFFSVTFTLMITYACCAGIAVNLNCVAWRANLAMAGVFAACLAILSSFGFISL CTVEFVNIVGVMPFLIIGIGIDDVFILLSGIADAVDIKDGPGKTVIENKMFFALKHSGVAITITSITDFLAFAIGASSTF ISVRNFCLYTGFAVFFCYLNQLFFFVPCIVINERRVEANRHFMSCMKTRSKEELKKDGKSRGHIFCCAGEQPKDRNDYDS YMEKYPKMLFQKIVKPLPCKIIILVCFAGYLAASIYGAVNLKQGLELRNLAADDSYFYKYDTWNRDYMPSQVPISFIIKS RQTYSAQTTQDSISAMLTAAKQDADIDDNIEINWLTAFQADASYTTTSESAFVSALVTFIQSNTKYENDVLFDSTNTHID ASRFYVFTVDLKDSQKQGKMMQRMRDIANNNALPAFPFHPSFIFFEQFVTILSATLQTIGIAVAAMTVITIIFMPYPVLV IFVMVTMMMILIGIFGFMHYWDLTLSSVTMIQLVMTVGFSVDFSAHICHGFISVSGSSKEDRVHKALDRTGGAVINAAFS SILGIMMLLASSGYIFRTFFKLMFLVMLFGLLHSVLFLPVVLSLIGPRPAEHTQVCKGIKQTTNQTLQTKKQ |
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