Gene
| Gene Model ID | pfu_aug2.0_1891.1_05299 |
|---|---|
| Locus | scaffold1891.1 : 1 ... 9045 : - |
| To GenomeBrowser | scaffold1891.1:1..9045 |
| Genes list of scaffold | scaffold1891.1 |
| Synonym | pfu_aug1.0_36336.1_33991 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1891.1_05299.t1 | 1 | 1 | RVT_1 | 306 | 425 | 7.2e-12 | 45.1 | 4.8e-15 | 1.8e-11 | 43.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1891.1_05299.t1 | gi|585650226|ref|XP_002733175.2| | PREDICTED: uncharacterized protein LOC100367813 [Saccoglossus kowalevskii] | 1.0e-24 |
| pfu_aug2.0_1891.1_05299.t1 | gi|308475765|ref|XP_003100100.1| | hypothetical protein CRE_21296 [Caenorhabditis remanei] | 2.0e-22 |
| pfu_aug2.0_1891.1_05299.t1 | gi|308447755|ref|XP_003087511.1| | hypothetical protein CRE_10791 [Caenorhabditis remanei] | 5.0e-20 |
| pfu_aug2.0_1891.1_05299.t1 | gi|308462401|ref|XP_003093484.1| | hypothetical protein CRE_26772 [Caenorhabditis remanei] | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_1891.1_05299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05299.t1 atggagacgcacgaagatataaagtcctatattcacgacgaagtagaagcatcccattctgctcttttaggccaactgaa cactctcatatcgtcaaaacttgaaaggtccgagaaaaaccaacgtgagttgtccgaaatgcagatgtccagaattcaaa atgacaattttacgcagaacacgtataaattcaaaagaaagagctgcgaggatcaataccagtttaactcaagcgtactc ggtaaaatgaaggaagctgaaagcggtttggatcacggagagctaagttcagcgaagcaaaaactggtagaaggtatgga attgatgaacaatcgtcaaaaattagtaaaacttgctgattcctccgagcttggatggaaagtggtagacgagtatgtca gtaatccgctcgcagaagattccgaagatgagaagtgtatgaatcgagctttttatgcagctaacagaaaagtcaaggca gagaagaaaaagcgggaaaagcgctatcgcccatacccaacacaaccacttgcatctacaggaaaaggggttcgtccagg ggtgtgctacaattgttacaagccaggtcattgggcaggggagtgtcatgagaagaaaggaaaagatacaggaaagataa gtacatgtagaaatgaattgaacaattgtactggtagcatatttgaacaaatgtttaatgagaattttaattcaggcagt ctttctgaacactctgtttttgttgaccggaacgatgcatgcatcagtgcgtcccaggtatttgatacaggtaaatgctc tagtgatcaagttcagtcacccgtgggtagattgaaatcttctacaaagaaatgggaatcttctggtgccagttcttaca ttttaaagtttgaagaggccaatgttgcaagacaaatgtttaaacaaggggatttcttgtttaaatttgatctgaaaggc gcatatcatcatgtcatgattctggaggaacagagaaagtatttaggtttcaaatggacatctgacggtcatgatcagta tttcgtatttaatgttcttccattcggtttgaaaaccgcaggttatattttcactatactgatgcgtgaagtcactaaat attggcgctctcaaggtcacaagatcatcttatccctggatgatggtctagttggtgaatcttcatatacagaagcaaag tcaatcagtgagtatatacatgcaagtttgaaggagtttggttttctcatagctgaggataaatgctcattggagccctc tacgtatatcacatggtttgattttatatgggatacacagacgggcttgaatcttcgacagcatgttcgggaagaggtcg ctaagacacgtcatatcaacgacagacttttgaatctctctgatagtatggcttgcagacttttgaactcgaaaagtgat tctacttcacagaagtatctatacagctacaagaagtacgaggcttttcttagatgtaacgacattcctttggacagtgc ttcaccaattcatgctgcgctttatatcaccgaccttcttgataaaggtgcatcttacagtgttgtatgtagtgttgctt acgccataaagttggtatgtgaattgaaaaatttatctaatccgtgtgacaatgcgtttgtgaaaaatctcatcgaatcc gcaaaacggtctgtgaataagcctgtcaacaagaaagatcccgtttccgtggacatgctcatacaaccacagaagagaca cattattctacaatctgattttcagtacaagatacctcatccattacaagatgcctcatccatgtaa |
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Protein
| Protein ID | pfu_aug2.0_1891.1_05299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05299.t1 METHEDIKSYIHDEVEASHSALLGQLNTLISSKLERSEKNQRELSEMQMSRIQNDNFTQNTYKFKRKSCEDQYQFNSSVL GKMKEAESGLDHGELSSAKQKLVEGMELMNNRQKLVKLADSSELGWKVVDEYVSNPLAEDSEDEKCMNRAFYAANRKVKA EKKKREKRYRPYPTQPLASTGKGVRPGVCYNCYKPGHWAGECHEKKGKDTGKISTCRNELNNCTGSIFEQMFNENFNSGS LSEHSVFVDRNDACISASQVFDTGKCSSDQVQSPVGRLKSSTKKWESSGASSYILKFEEANVARQMFKQGDFLFKFDLKG AYHHVMILEEQRKYLGFKWTSDGHDQYFVFNVLPFGLKTAGYIFTILMREVTKYWRSQGHKIILSLDDGLVGESSYTEAK SISEYIHASLKEFGFLIAEDKCSLEPSTYITWFDFIWDTQTGLNLRQHVREEVAKTRHINDRLLNLSDSMACRLLNSKSD STSQKYLYSYKKYEAFLRCNDIPLDSASPIHAALYITDLLDKGASYSVVCSVAYAIKLVCELKNLSNPCDNAFVKNLIES AKRSVNKPVNKKDPVSVDMLIQPQKRHIILQSDFQYKIPHPLQDASSM |
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