Gene
| Gene Model ID | pfu_aug2.0_1891.1_05300 |
|---|---|
| Locus | scaffold1891.1 : 22056 ... 29087 : + |
| To GenomeBrowser | scaffold1891.1:22056..29087 |
| Genes list of scaffold | scaffold1891.1 |
| Synonym | pfu_aug1.0_20358.1_33096 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1891.1_05300.t1 | 1 | 1 | H_lectin | 133 | 200 | 4.4e-19 | 67.8 | 1.9e-22 | 9.4e-19 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1891.1_05300.t1 | gi|260835655|ref|XP_002612823.1| | hypothetical protein BRAFLDRAFT_67229 [Branchiostoma floridae] | 8.0e-08 |
| pfu_aug2.0_1891.1_05300.t1 | gi|630965186|ref|XP_007879001.1| | hypothetical protein PFL1_03293 [Pseudozyma flocculosa PF-1] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1891.1_05300.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05300.t1 atggtaggcctcggcacagcgtcagcagacacggactcggattatgacccagtatcgactaatatgtgggaggaaataca aaggcttcgctcattggtcaatcaggagactgacctacggctcgcatttgagcaaattttcgtcacacatctggaccatc tcagaaatataaagtcttctctcattgatgaaacaatgtcagcattacagcctgctttaagctctataaatagcttagaa agaaatgtttccttgctcgagaatcagactagaacatttgtcgatggagtcaataatgaattcaaaacaattcaacagaa catttcgggactgaggcggttaggatgtctgacaggctctcagaagtactattcacgggtccattccgcatggtcccaac agaggaacataacattttcgactgcgtttgacagaatcccagctgtatcagtcggtataagaacactagatagtcacaag gattataatatcagagctaatactgaagcacgtaacataacagagactggttttatccttatcttaaaaacgtggtctaa tacttttcagtatggactaacagccaactggatggcatgtcctgccaaaatgacagaggactaa |
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Protein
| Protein ID | pfu_aug2.0_1891.1_05300.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05300.t1 MVGLGTASADTDSDYDPVSTNMWEEIQRLRSLVNQETDLRLAFEQIFVTHLDHLRNIKSSLIDETMSALQPALSSINSLE RNVSLLENQTRTFVDGVNNEFKTIQQNISGLRRLGCLTGSQKYYSRVHSAWSQQRNITFSTAFDRIPAVSVGIRTLDSHK DYNIRANTEARNITETGFILILKTWSNTFQYGLTANWMACPAKMTED |
|