Gene
| Gene Model ID | pfu_aug2.0_1891.1_05303 |
|---|---|
| Locus | scaffold1891.1 : 124956 ... 126394 : + |
| To GenomeBrowser | scaffold1891.1:124956..126394 |
| Genes list of scaffold | scaffold1891.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1891.1_05303.t1 | 2 | 1 | I-set | 9 | 51 | 2.3e-14 | 53.0 | 9.7e-09 | 2.9e-05 | 23.8 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 1 | Ig_2 | 9 | 54 | 1.8e-08 | 34.3 | 4.8e-06 | 0.014 | 15.4 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 1 | V-set | 20 | 52 | 1.2e-09 | 38.0 | 1.6e-08 | 4.6e-05 | 23.2 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 1 | ig | 23 | 50 | 4.4e-06 | 26.7 | 1.4e-06 | 0.0042 | 17.1 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 1 | Ig_3 | 33 | 51 | 4.6e-07 | 30.2 | 0.00066 | 1.9 | 9.0 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 2 | V-set | 74 | 109 | 1.2e-09 | 38.0 | 1.9e-05 | 0.055 | 13.3 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 2 | I-set | 76 | 106 | 2.3e-14 | 53.0 | 6.8e-10 | 2.0e-06 | 27.5 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 2 | Ig_3 | 79 | 112 | 4.6e-07 | 30.2 | 3.1e-07 | 0.00093 | 19.6 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 2 | Ig_2 | 80 | 106 | 1.8e-08 | 34.3 | 1.3e-06 | 0.0037 | 17.3 |
| pfu_aug2.0_1891.1_05303.t1 | 2 | 2 | ig | 85 | 106 | 4.4e-06 | 26.7 | 0.0012 | 3.5 | 7.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1891.1_05303.t1 | gi|676463653|ref|XP_009056665.1| | hypothetical protein LOTGIDRAFT_120548, partial [Lottia gigantea] | 3.0e-28 |
| pfu_aug2.0_1891.1_05303.t1 | gi|524865288|ref|XP_005089474.1| | PREDICTED: opioid-binding protein/cell adhesion molecule homolog isoform X2 [Aplysia californica] | 1.0e-26 |
| pfu_aug2.0_1891.1_05303.t1 | gi|524869205|ref|XP_005091399.1| | PREDICTED: lachesin-like [Aplysia californica] | 1.0e-25 |
| pfu_aug2.0_1891.1_05303.t1 | gi|676433306|ref|XP_009046857.1| | hypothetical protein LOTGIDRAFT_138404, partial [Lottia gigantea] | 5.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1891.1_05303.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05303.t1 atgaatccacaacatatagtaataaccaaggaggatcagaaggtgatagatgactcccgggtcagcatagagagacagta cacacaggactggaatctacacatccgtaacatacaatacagggatgaggggacgtataaatgtatagtgaacacggata aacctctcattaggcatatatatctcagtgtgagggttccaccccacatagacgaggcttcgtccagtaaaagtaagata gaagtcctagaaggtaggactgtagaactgaactgtaacgcatccggggtaccgacacctcgtatcaggtggttcaggat taccacgtacgatatgggaaataaagaag |
|
Protein
| Protein ID | pfu_aug2.0_1891.1_05303.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1891.1_05303.t1 MNPQHIVITKEDQKVIDDSRVSIERQYTQDWNLHIRNIQYRDEGTYKCIVNTDKPLIRHIYLSVRVPPHIDEASSSKSKI EVLEGRTVELNCNASGVPTPRIRWFRITTYDMGNKE |
|