Gene
| Gene Model ID | pfu_aug2.0_19.1_29980 |
|---|---|
| Locus | scaffold19.1 : 69396 ... 85096 : + |
| To GenomeBrowser | scaffold19.1:69396..85096 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_29514.1_19310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_29980.t1 | 5 | 1 | FA_hydroxylase | 93 | 128 | 2.8e-19 | 69.5 | 0.48 | 1800.0 | -0.7 |
| pfu_aug2.0_19.1_29980.t1 | 5 | 2 | FA_hydroxylase | 134 | 241 | 2.8e-19 | 69.5 | 7.6e-23 | 2.8e-19 | 69.5 |
| pfu_aug2.0_19.1_29980.t1 | 5 | 3 | FA_hydroxylase | 285 | 299 | 2.8e-19 | 69.5 | 4.0 | 15000.0 | -3.8 |
| pfu_aug2.0_19.1_29980.t1 | 5 | 4 | FA_hydroxylase | 354 | 396 | 2.8e-19 | 69.5 | 0.00015 | 0.56 | 10.6 |
| pfu_aug2.0_19.1_29980.t1 | 5 | 5 | FA_hydroxylase | 430 | 505 | 2.8e-19 | 69.5 | 0.25 | 910.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_29980.t1 | gi|585640455|ref|XP_006880441.1| | PREDICTED: alkylglycerol monooxygenase [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_19.1_29980.t1 | gi|584041108|ref|XP_006779115.1| | PREDICTED: alkylglycerol monooxygenase [Myotis davidii] | 0.0 |
| pfu_aug2.0_19.1_29980.t1 | gi|507931098|ref|XP_004676792.1| | PREDICTED: alkylglycerol monooxygenase isoform X1 [Condylura cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_29980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29980.t1 atggaagcgtggcccttaataaagtcaaaagtttttccaggtttaagaagattagtttatctagtttctccaaatgagac atcatttgaaactgttgaggatgttcccaaatatgttgatgaggccatcccgttctttgtagctactgatttccatcatg ttgatatttgtttacaggcgattccattctttgttgccttgatgctactggagatccctatattacttgtaaaggggaag aaactgccgcgcttcaatgatggattcagttctatcgccaatggtttattgtcacttctccacaatttgctgttccggtc agtagagctagccacgtatatctgggtttttgagcattttaacattgtacagttaccatgggacagtccctggacatggc ttgccggctttttgggtgtggactttggatattattgggtacatcgctgtggacatgaagtgaatatattttgggcggga caccaaacacaccatagctcagaagactataaccttaccactgcactacgccagtctgcacttctcaaatatatatcatg gatattttatttaccattagccctgtttgttccgccctctgtttttcttgtacacagtcagtttaaccttctctatcagt tctggatccataccgagacagtagacaaattaggacctttagaatggatcttaaacactccaagtcaccacagagttcat catggaagaaacagatactgtatcgacaaaaactatggcggcactcttataatatttgacagaatatttggtacatttga agcagagaaggaagaagtggtatatgggctggttcacccacttaatacatggaatcctttatattctcagttttgccatt tgatgtacatgtgggaggtgtttaagactacagaaggatttggtaacaagttatcagtgatactaaaaggtccaggctgg ggcccgggtaaacctcgtaccggtctcatagaggatatacctgatgtacatgcacctcaggaaagatacaacagtgatct cccattatgggctaatctgtacgtatggctacacattggtctactcctggtaggatatagtctaatggcagcaaataaaa agacagtagacaaattaggacctttagaatggatcttaaacactccaagtcaccacagagttcaccatggaagaaacaga tactgtattgacaaaaactatgggggcactcttatcatatttgacagaatttttggtacatttgaagcagagaaggaaga agtggtatatgggcttgtccacccacttaacacatggaatcctttatattctcaggtacatgcacctcaggaaagataca acagtgatctcccattatgggctaatctgtatgtatggctacacatgggtctactcctggtaggatatagtctaatggca gcaaataaaacggcttttccggtttacttcatagttgccggtattgtgtttatagtgtttaccctgacttgttttggatt tctatacgatcacaaaaaatcgggaccagctctagagctgattagatgtgccatactaacagtgtccctgagaacagtta ctgcccctgattcactggggccgcttcacttagccgtaacgtgcatatatgcaggatccgtcttgatttggacgtttata tgcctgggacaggtgtctgtcacagttaaagcaaagaaaatacagtga |
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Protein
| Protein ID | pfu_aug2.0_19.1_29980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29980.t1 MEAWPLIKSKVFPGLRRLVYLVSPNETSFETVEDVPKYVDEAIPFFVATDFHHVDICLQAIPFFVALMLLEIPILLVKGK KLPRFNDGFSSIANGLLSLLHNLLFRSVELATYIWVFEHFNIVQLPWDSPWTWLAGFLGVDFGYYWVHRCGHEVNIFWAG HQTHHSSEDYNLTTALRQSALLKYISWIFYLPLALFVPPSVFLVHSQFNLLYQFWIHTETVDKLGPLEWILNTPSHHRVH HGRNRYCIDKNYGGTLIIFDRIFGTFEAEKEEVVYGLVHPLNTWNPLYSQFCHLMYMWEVFKTTEGFGNKLSVILKGPGW GPGKPRTGLIEDIPDVHAPQERYNSDLPLWANLYVWLHIGLLLVGYSLMAANKKTVDKLGPLEWILNTPSHHRVHHGRNR YCIDKNYGGTLIIFDRIFGTFEAEKEEVVYGLVHPLNTWNPLYSQVHAPQERYNSDLPLWANLYVWLHMGLLLVGYSLMA ANKTAFPVYFIVAGIVFIVFTLTCFGFLYDHKKSGPALELIRCAILTVSLRTVTAPDSLGPLHLAVTCIYAGSVLIWTFI CLGQVSVTVKAKKIQ |
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