Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_19.1_29982
Locus scaffold19.1 : 100876 ... 102619 : +
To GenomeBrowser scaffold19.1:100876..102619
Genes list of scaffold scaffold19.1
Synonym pfu_aug1.0_2527.1_30151

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_19.1_29982.t1 1 1 Sulfatase 22 378 0.0 159.5 0.0 0.0 159.2
pfu_aug2.0_19.1_29982.t1 1 1 Phosphodiest 52 325 5.8e-10 39.0 1.0e-12 5.0e-09 35.9

Transcript
Transcript IDpfu_aug2.0_19.1_29982.t1
Definition-
>pfu_aug2.0_19.1_29982.t1
atgaactcgttcgtcctaacattattggtcttcagtaatttacacctaagtgcagctgtgacaaatgttcttttctttgt
tgtggacgatctaagaccggaactacgatgttattacgaaaataatgtttcaactaataacttccatccgtttatgcata
ctccaaatatagatgcattggcggcaaaaagcctccttctaaaacgtgcgtatgctcaggtggctacttgtaatcctagt
cgatcctcatttcttacgggacgaagacctggaacaactaagatttataatcaagtaggaggctacttcagggatcacgg
tggtaatttcacaactttgccacaatatttcaaaatgaagggatataattccgtaggcatgggtaaaatttttcagcccg
gtagacaatcaaactacgatgatccaatttcttggaacatgccatatttccatgctcctaatcaggaattttggtcctca
gataacgaaagttggatggctgtatccgaggaattgttgcaagaaaaacctcttccagattaccaaatagcggaacatgc
agttgagaccttacggtcattagctccagatgccgtaacgagagaaaaaccattctttatggcagtaggattccgtaagc
cacatcttccttttacgtttcctgaaacaatgcttcaatattacccagaaggaaatatccgtttgcctgataatcaatat
cctcctcacaatatgcctcttgttgcatggtcaaactgctatgaattcgtcaattttggatatcttcgaaacgaaaatgt
aacgatatctatcaactctacatttccagaaaaacttgtacttgatttaagaagagcgtatttcagttcggtaagttggg
ttgactctctagttggaagagttttgacagagctacaaacgttaggtctagcagacaacactgttgtatcgcttgttggg
gatcatggatggcaactcggagaacatggcgaatggtgtaaatcaacaaattttgaattgtcaacgagagtgcctatgat
gttacacattccaggcgtaacaaacaatggtattgtgtcagaacagattgctgagttagttgatttatttcccactatta
ccgatgctgtaggcctaggaccactatcaacttgtccagaaaattcttcaaaaattgaactttgtgcagaaggagtgagt
ctactaccaatgattagcaatcccaataaaccattaaagaaagctgccttctctctccatcgtagacaggttaattctac
tgcaacagctatgggctactcaataagaacacagcagtacagatacacggaatgggtgaaattttctgatggacctctct
ttgagactgactggagtgttctatttggtgttgaattatacgatcatggaacggatccagatgagaatataaacaaagca
cactatgagtcatatcgtgaagtaagacacaccttgagcaaacagcttcgtgatggatggagacaatcggtatatgccgt
tagtggggttaccggaatggagggaaggatggataatgggcttgttttgctaggtctgctcattacattatcaattatta
aaaccgaataa

Protein
Protein IDpfu_aug2.0_19.1_29982.t1
Definition-
>pfu_aug2.0_19.1_29982.t1
MNSFVLTLLVFSNLHLSAAVTNVLFFVVDDLRPELRCYYENNVSTNNFHPFMHTPNIDALAAKSLLLKRAYAQVATCNPS
RSSFLTGRRPGTTKIYNQVGGYFRDHGGNFTTLPQYFKMKGYNSVGMGKIFQPGRQSNYDDPISWNMPYFHAPNQEFWSS
DNESWMAVSEELLQEKPLPDYQIAEHAVETLRSLAPDAVTREKPFFMAVGFRKPHLPFTFPETMLQYYPEGNIRLPDNQY
PPHNMPLVAWSNCYEFVNFGYLRNENVTISINSTFPEKLVLDLRRAYFSSVSWVDSLVGRVLTELQTLGLADNTVVSLVG
DHGWQLGEHGEWCKSTNFELSTRVPMMLHIPGVTNNGIVSEQIAELVDLFPTITDAVGLGPLSTCPENSSKIELCAEGVS
LLPMISNPNKPLKKAAFSLHRRQVNSTATAMGYSIRTQQYRYTEWVKFSDGPLFETDWSVLFGVELYDHGTDPDENINKA
HYESYREVRHTLSKQLRDGWRQSVYAVSGVTGMEGRMDNGLVLLGLLITLSIIKTE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495