Gene
| Gene Model ID | pfu_aug2.0_19.1_29986 |
|---|---|
| Locus | scaffold19.1 : 193796 ... 202045 : - |
| To GenomeBrowser | scaffold19.1:193796..202045 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_29986.t1 | 5 | 1 | TSP_1 | 18 | 66 | 0.0 | 185.0 | 2.4e-14 | 3.6e-10 | 39.7 |
| pfu_aug2.0_19.1_29986.t1 | 5 | 2 | TSP_1 | 73 | 123 | 0.0 | 185.0 | 1.4e-16 | 2.1e-12 | 46.9 |
| pfu_aug2.0_19.1_29986.t1 | 5 | 3 | TSP_1 | 131 | 181 | 0.0 | 185.0 | 4.9e-12 | 7.3e-08 | 32.4 |
| pfu_aug2.0_19.1_29986.t1 | 5 | 4 | TSP_1 | 188 | 238 | 0.0 | 185.0 | 5.4e-16 | 8.1e-12 | 45.0 |
| pfu_aug2.0_19.1_29986.t1 | 5 | 5 | TSP_1 | 245 | 295 | 0.0 | 185.0 | 2.5e-16 | 3.7e-12 | 46.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_29986.t1 | gi|675886108|ref|XP_009028556.1| | hypothetical protein HELRODRAFT_89118, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_19.1_29986.t1 | gi|733899792|ref|XP_010713843.1| | PREDICTED: hemicentin-1 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_19.1_29986.t1 | gi|156402616|ref|XP_001639686.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_29986.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29986.t1 atgaaattcaatttttcaaacgaagtaccggtacatggtaaatgggctacctggggtagttatacagcctgtagcgtcac atgtggtgtgggaatccgaacacggacacggacctgttcagatccagctcctcagaatggcggtagtcattgtactggaa gcagtagtcaatgttcatcttgtcaaatgcagagctgtcctattgatggacgctggagctcatggggaagctggggagca tgtaatgtgacatgtgacggaggttacagagatcgaattagaagctgctcgaatcctcttcctcagtttggcggaacaaa ttgctctggtgatgaagagcaacttcaagtctgtaatccaaaagcatgtccaggagtatttggggaatggagtcagtggt ctaatgctagcgagtgctccgttacatgtgggatcggtattcaaataaagaacagaacatgtgaggatccttggtttgga agcagtaatgtaacttgcattggaaaaaatatagaatcaaagtcttgtgacatgggaaattgtccgattgacggtagctg gtcgacatggggtagctgggaggcgtgtagtgatacatgtggttccggaatacagtacaggtatcgttcatgtacatcac catcgccttctttgggtggacaggactgcgtgggcagtgattcagatttcaatgtttgtaactatttaaactgtccagtt gatggagcttggagtccatggagtgtatggggaggatgtaatgtaacttgcgggggcggatcccgaactcgcagtagaac atgttcagatccctcaccacagtataacggagcattctgctttggaccttcggttgaatttgatgattgcaactaccaaa actgcatagataatacctcttcaggagcagtatgtcaatgtttatgcaacgagcagaatataacacttgaagacagactg gtaaagatcaagaatgaaatgactgtcgacacatccgagttgtcctcatcaaagaggaaactgacatgtgcagaggatga tagaacgtctgcgagacaagttggatttgttggtgctttacttttatgtatatgtggatttctgatcatttccggagaca tgttcgcccttgcatcttatatatgtgccaagaattcgctttttagatctaggcaataa |
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Protein
| Protein ID | pfu_aug2.0_19.1_29986.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29986.t1 MKFNFSNEVPVHGKWATWGSYTACSVTCGVGIRTRTRTCSDPAPQNGGSHCTGSSSQCSSCQMQSCPIDGRWSSWGSWGA CNVTCDGGYRDRIRSCSNPLPQFGGTNCSGDEEQLQVCNPKACPGVFGEWSQWSNASECSVTCGIGIQIKNRTCEDPWFG SSNVTCIGKNIESKSCDMGNCPIDGSWSTWGSWEACSDTCGSGIQYRYRSCTSPSPSLGGQDCVGSDSDFNVCNYLNCPV DGAWSPWSVWGGCNVTCGGGSRTRSRTCSDPSPQYNGAFCFGPSVEFDDCNYQNCIDNTSSGAVCQCLCNEQNITLEDRL VKIKNEMTVDTSELSSSKRKLTCAEDDRTSARQVGFVGALLLCICGFLIISGDMFALASYICAKNSLFRSRQ |
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