Gene
| Gene Model ID | pfu_aug2.0_19.1_29988 |
|---|---|
| Locus | scaffold19.1 : 267786 ... 286301 : + |
| To GenomeBrowser | scaffold19.1:267786..286301 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_1606.1_66037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_29988.t1 | 2 | 1 | UPF0061 | 37 | 443 | 0.0 | 371.0 | 0.0 | 0.0 | 349.0 |
| pfu_aug2.0_19.1_29988.t1 | 2 | 2 | UPF0061 | 509 | 582 | 0.0 | 371.0 | 1.2e-08 | 0.00017 | 20.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_29988.t1 | gi|524892177|ref|XP_005102618.1| | PREDICTED: selenoprotein O-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_19.1_29988.t1 | gi|676481799|ref|XP_009062497.1| | hypothetical protein LOTGIDRAFT_128503 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_19.1_29988.t1 | gi|556972085|ref|XP_005994310.1| | PREDICTED: selenoprotein O-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_19.1_29988.t1 | gi|156406460|ref|XP_001641063.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_19.1_29988.t1 | gi|315139008|ref|NP_001186712.1| | selenoprotein O [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_29988.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29988.t1 atgtcaacgctgaaaaatctgaaatttgataatttggcgctgaagactttgccacttgacactgaaaaggagaattatgt gagacaagttccaggtgcctgtttttctagggtaggcctaacacccgtcgagaaccctactttggtagctgcctccattc cagctcttggtctacttgacataacagaatctgatgtagaaagtgaagactttgccgagtattttgcgggaaataaactt ttacccggcagtgaaacagcggcacattgttactgcggacaccagtttggttatttttctggacagcttggagatggggc tgccatgtacttgggagaagtcctcaacaaaaagggagagagatgggagattcagctgaaaggatctggtaaaacaccat actctcgacacgctgacgggaggaaagtcctcaggagcaccatcagagaattcctgtgtagtgaggctatacacaaccta gggatacctacaacacgagcaggtacttgtgtgacgtcagattccctagttgtcagggacattttttacgacggccatcc tattgaggaaaggtgctctatagttctgagaattgctccaacgtttttgaggtttggctcctttgaaattttcaagcaga cagacagagagacagggaggaagggtcccagtgttggacgacaggatattttagtcactatgctggattatacaatcaaa aatttatacccagagatatggcaggcccataattctgacaaggagacgatgtatgtagaattctataaagaagtagtaag gaggacggcaagactggtggcaaaatggcagtgtgtaggatggtgtcacggtgtacttaatacagacaatatgagtattg taggggtaacaatagactatggaccttatggcttcatggatgcatatgacccaggatatgtttgtaatgcttcagatgac agtgctaggtattcgtatcaaaagcagccagagatttgtaaatggaactgtaaaaaactggcagaggcaattcagggggc cgtacccatgtcaaaaacggagcctgaaatgtacggtatctatgatgaggtgtacagcacagagtatactaaaggcatga ggaataagctaggacttttgaataagcaattggccgaggatggtaagcttgttgagtcactcatggacaccatgcacaag accggtgcagattttaccaactgtttccgatgtctgagccgagtgcctctacccggtgacagtaccttcgactccagtgt gaaagaggtcatcgagtacattctatcccagtgtgcaacagtggaagaaatgaagcttacctgtaaaccaaggatggatc caagacagttccagatgttccttatgttaatggagactaaccctggcatgttgccggtattagggcggggcttcatagcg gtgcagcaggaactggagaggttagagaaaaggaaagaattggaggaaaagacagaagacagccaaagagaagaaaacat gaagttatggcagagctggtttgacgagtataaaacaagactagagaaggaattagagggaattactgatgttatagaag ctaatacaaagaggaaagatgtcatgaactcgtcaaatcctagatttatcttgaggaactacatagcacagaatgcgatt tctgcagcagaaaagggggacttcagtgaagttagaaaagttttaaaactattggaaactccattcagtgaaaacatgga tctgactgggattgatcatactcacaaagaagcttcagaatattcaacttcaactaaagatgaagaaaaagtagaaggtg ccaaaggaaactcaaaatcagacaagggcagtaactcctgtcagactagccatgttggacttttatatgatggcaagcct cctgattggtcggttgatctcagggtcacatga |
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Protein
| Protein ID | pfu_aug2.0_19.1_29988.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29988.t1 MSTLKNLKFDNLALKTLPLDTEKENYVRQVPGACFSRVGLTPVENPTLVAASIPALGLLDITESDVESEDFAEYFAGNKL LPGSETAAHCYCGHQFGYFSGQLGDGAAMYLGEVLNKKGERWEIQLKGSGKTPYSRHADGRKVLRSTIREFLCSEAIHNL GIPTTRAGTCVTSDSLVVRDIFYDGHPIEERCSIVLRIAPTFLRFGSFEIFKQTDRETGRKGPSVGRQDILVTMLDYTIK NLYPEIWQAHNSDKETMYVEFYKEVVRRTARLVAKWQCVGWCHGVLNTDNMSIVGVTIDYGPYGFMDAYDPGYVCNASDD SARYSYQKQPEICKWNCKKLAEAIQGAVPMSKTEPEMYGIYDEVYSTEYTKGMRNKLGLLNKQLAEDGKLVESLMDTMHK TGADFTNCFRCLSRVPLPGDSTFDSSVKEVIEYILSQCATVEEMKLTCKPRMDPRQFQMFLMLMETNPGMLPVLGRGFIA VQQELERLEKRKELEEKTEDSQREENMKLWQSWFDEYKTRLEKELEGITDVIEANTKRKDVMNSSNPRFILRNYIAQNAI SAAEKGDFSEVRKVLKLLETPFSENMDLTGIDHTHKEASEYSTSTKDEEKVEGAKGNSKSDKGSNSCQTSHVGLLYDGKP PDWSVDLRVT |
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