Gene
| Gene Model ID | pfu_aug2.0_19.1_29992 |
|---|---|
| Locus | scaffold19.1 : 326886 ... 340340 : + |
| To GenomeBrowser | scaffold19.1:326886..340340 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_14347.1_46746 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_29992.t1 | 5 | 1 | ShK | 71 | 106 | 3.8e-15 | 55.9 | 3.7e-08 | 0.00055 | 20.2 |
| pfu_aug2.0_19.1_29992.t1 | 5 | 2 | ShK | 115 | 151 | 3.8e-15 | 55.9 | 4.4e-10 | 6.6e-06 | 26.3 |
| pfu_aug2.0_19.1_29992.t1 | 5 | 3 | ShK | 166 | 199 | 3.8e-15 | 55.9 | 0.00093 | 14.0 | 6.1 |
| pfu_aug2.0_19.1_29992.t1 | 5 | 4 | ShK | 202 | 234 | 3.8e-15 | 55.9 | 0.0011 | 17.0 | 5.8 |
| pfu_aug2.0_19.1_29992.t1 | 5 | 5 | ShK | 243 | 279 | 3.8e-15 | 55.9 | 4.5e-09 | 6.7e-05 | 23.1 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_29992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29992.t1 atgtgtgacagacggacagacagacggacgacgaaggcaaaaccaatatgtctcctccccgttggggggagacataatga tgaccaatcgattcttgctgaggctgtgagcgctcctcagaaacgacagacaccacctgttattaacttattcttcggaa ctgctgctccggcaactctggcatcgagtaacaatggacaacctgataccaagtgtaaagacaaattggataactgtgta cagttcggacaaacctcttgtaaagcaccatacacagattgggcaaaagattattgtccggtatactgcggattctgccc atctcaaccaactcctccaaaaccctgcattgacaagctgaaagactgtggctcctatggaggacaagtctgtaacgaca caaagtacgagccatgggtcaatgaaaattgccgatattcctgcaaaaagtgtggctcagatgttctttatacaactacg acaatggctcctgaaaattgtacagacaaattggaatgtaaaaattacggaaaaagtgcgtgtactcaatatgagcaatg ggcacgtgacaactgtatgaactactgtgagttctgcaaagattgtacagacaaattggaatgtaaaaattacggaaaaa gtgcgtgtactcaatatgagcaatgggcacgtgacaactgtatgaactactgtgagttctgcaaaggtaaaccgacccct ccagttccatgtgtagacagaatcccaaattgtgatcggtatgatccatcgtcttgtactgatcagaaatacagaccgtg ggccgaggaaaattgtcgccaacactgcaagatctgtaacgatatggtttatccgacattgccacctgcaccgggtagat aa |
|
Protein
| Protein ID | pfu_aug2.0_19.1_29992.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29992.t1 MCDRRTDRRTTKAKPICLLPVGGRHNDDQSILAEAVSAPQKRQTPPVINLFFGTAAPATLASSNNGQPDTKCKDKLDNCV QFGQTSCKAPYTDWAKDYCPVYCGFCPSQPTPPKPCIDKLKDCGSYGGQVCNDTKYEPWVNENCRYSCKKCGSDVLYTTT TMAPENCTDKLECKNYGKSACTQYEQWARDNCMNYCEFCKDCTDKLECKNYGKSACTQYEQWARDNCMNYCEFCKGKPTP PVPCVDRIPNCDRYDPSSCTDQKYRPWAEENCRQHCKICNDMVYPTLPPAPGR |
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