Gene
| Gene Model ID | pfu_aug2.0_19.1_29993 |
|---|---|
| Locus | scaffold19.1 : 351811 ... 373545 : + |
| To GenomeBrowser | scaffold19.1:351811..373545 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_14347.1_46745 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_29993.t1 | 6 | 1 | ShK | 51 | 86 | 5.2e-21 | 74.7 | 4.7e-07 | 0.007 | 16.7 |
| pfu_aug2.0_19.1_29993.t1 | 6 | 2 | ShK | 95 | 131 | 5.2e-21 | 74.7 | 6.9e-10 | 1.0e-05 | 25.7 |
| pfu_aug2.0_19.1_29993.t1 | 6 | 3 | ShK | 146 | 179 | 5.2e-21 | 74.7 | 0.00023 | 3.5 | 8.0 |
| pfu_aug2.0_19.1_29993.t1 | 6 | 4 | ShK | 188 | 224 | 5.2e-21 | 74.7 | 1.6e-08 | 0.00024 | 21.3 |
| pfu_aug2.0_19.1_29993.t1 | 6 | 5 | ShK | 787 | 825 | 5.2e-21 | 74.7 | 3.5e-06 | 0.052 | 13.9 |
| pfu_aug2.0_19.1_29993.t1 | 6 | 6 | ShK | 835 | 871 | 5.2e-21 | 74.7 | 2.6e-08 | 0.00038 | 20.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_29993.t1 | gi|575482358|ref|XP_006680473.1| | hypothetical protein BATDEDRAFT_89998 [Batrachochytrium dendrobatidis JAM81] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_29993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29993.t1 atgttattttctgtatttctctgtactgttttgttctctggggcttttagcgctcctcagaaaagacagacgcagccagt gtttaatttattcttcggaaccgctgcccccacacctcaggcctacgtaaacaatggacaacccgatccaaattgtaaag acaaactggacaactgtgtacagttcggacaaacatcttgtaaagaaccttacttacaatgggctaaagattattgtccg gcttactgtggcatctgtacacctgtcccgaccgctccaaaaccatgcgtggacaaactgagtgattgtagttcctacgg gcaaagagtctgtactgattcaaagtatgagccatgggtcaatgaaaattgccgatatttctgcaaaaagtgtggtactg gtgttgtttatacgactactacaatagcaccagaaaactgcgttgacaaactggaatgcaaaaattacggaaaggctgca tgtactcaatacgagagctgggcacgggacaattgtaagaactactgcgagttctgcaaaggtaaacccactccacctac tccatgtgtggacaaaatccctaattgtgatcgatatgatcccaaatcatgtactgacgaaaaatacagaccgtgggcag aggaaaattgtcgtcaacattgcaagatctgtactggtggtcctaatttggctccatcggtgacaaacgccatagttaga ccaacctacgccccaggaaatgcacccaccctcccctacaagatccccacccctgggtcaggaggaatcgtatacccaac attatcaccagggaaacgggaaataccacctctgaaacgacagattttcgccttaccccctggtgttgatgcttccaatg gcggtccagtatcctatatgccaaaaactaaagcaccacccaccaccaccaccacgactactactaccaccaccaccacc accaccatggcccccaccaccacccaggcacctacgaccgaagcccctaccacaaccgaagcacccactacaaccaccac cacccaagcacctacaaccacgcccaaaccaacagaaccaccaaagaaagagtgtttcttccccatacctccaggatctg aaccaattgattatccaaaccccgtcagtggacccatagatcctcaatgtttcatcaagcccacagagaagcccccagag accactagaatggacaactcaacagataacggcaataacacatccggcactgacatgacaaccatgggcccagatacaaa ctccacgaccgcccccgccaccacagaaatgcccaccactgaaatgtccactacggaaatgcccaccacagatatgccca ccacggaaatgcccacgactgctatgccagacaacggcactgataacggtaacggtactgatatgggtccttcgaccacg cctcaaccacagccgtgcggtagcgagccagatgcttgcactcctggaaatggtacagattccggcaatggtacagatag cggaagcggatctgggaccacaagcggtaacggaagcggatctgtgactacaagcggtaacggatcaatgggaggcgcca caacaggaagtggtggatccggcactggaagcggaaatatgggtggtacaactgacagtggaaatatgggtggaaccaca gctggtggaaatatgggcggatccacatctggtggaaacatgggcggtaccactgctggaggaaatatgggcggaaccac cgctggtggaaacatcggcggtaccactgccggaagcggaagtggatcgtctggatcatcaaacggaagcggaaatcaag gcacaacatccggaacgggtggaatccccaccaaggcacccaccaatcctccagtagtaataagtgtaacagctgcaccg tctgccactaatccccctgtacccacaaaaccagccgcttcccctgctatgtctaccatgccggacaccactgtagctgt aaccacccccgctgtctccacaaagctagatacgactgtatctattgacaccaccactgattccataacaccatctccag atgcatcccaaggtgtacccaccaagatgcctcaaccaacgaaatcctcagctggtaccgctactgtggcagtacccacc aaacctgcttccggaagtggctctacagccggttccggtggcgtccccactaaagctccatcatctggctcatcaggaag ttccggagccgtaccaacgaagccaagttcttcaggtagcggaggagcaactatattgatccctgcaggtacagatctac caatcgtgaacccaaatgcaaactacacagagagtgctaattgcacggatgacccaaatattgattgccgactttacaat gctaccaagatctgtgctgatggcagtgtatatcgtccgtggactcttcagcactgtaaacaattctgtggtctaggaaa ttgcacgaagccaacgttaggaccatgtatagatgagattaacaactgtgatgagtaccaagacgacctctgtactaacc acatattccttctgttcagacagaagaattgtagaaagttctgtggtatatgtgatcaagctgttcgtgagaaacaagat cagactgagaagacaagaggcccagatgggtctgtatag |
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Protein
| Protein ID | pfu_aug2.0_19.1_29993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_29993.t1 MLFSVFLCTVLFSGAFSAPQKRQTQPVFNLFFGTAAPTPQAYVNNGQPDPNCKDKLDNCVQFGQTSCKEPYLQWAKDYCP AYCGICTPVPTAPKPCVDKLSDCSSYGQRVCTDSKYEPWVNENCRYFCKKCGTGVVYTTTTIAPENCVDKLECKNYGKAA CTQYESWARDNCKNYCEFCKGKPTPPTPCVDKIPNCDRYDPKSCTDEKYRPWAEENCRQHCKICTGGPNLAPSVTNAIVR PTYAPGNAPTLPYKIPTPGSGGIVYPTLSPGKREIPPLKRQIFALPPGVDASNGGPVSYMPKTKAPPTTTTTTTTTTTTT TTMAPTTTQAPTTEAPTTTEAPTTTTTTQAPTTTPKPTEPPKKECFFPIPPGSEPIDYPNPVSGPIDPQCFIKPTEKPPE TTRMDNSTDNGNNTSGTDMTTMGPDTNSTTAPATTEMPTTEMSTTEMPTTDMPTTEMPTTAMPDNGTDNGNGTDMGPSTT PQPQPCGSEPDACTPGNGTDSGNGTDSGSGSGTTSGNGSGSVTTSGNGSMGGATTGSGGSGTGSGNMGGTTDSGNMGGTT AGGNMGGSTSGGNMGGTTAGGNMGGTTAGGNIGGTTAGSGSGSSGSSNGSGNQGTTSGTGGIPTKAPTNPPVVISVTAAP SATNPPVPTKPAASPAMSTMPDTTVAVTTPAVSTKLDTTVSIDTTTDSITPSPDASQGVPTKMPQPTKSSAGTATVAVPT KPASGSGSTAGSGGVPTKAPSSGSSGSSGAVPTKPSSSGSGGATILIPAGTDLPIVNPNANYTESANCTDDPNIDCRLYN ATKICADGSVYRPWTLQHCKQFCGLGNCTKPTLGPCIDEINNCDEYQDDLCTNHIFLLFRQKNCRKFCGICDQAVREKQD QTEKTRGPDGSV |
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