Gene
| Gene Model ID | pfu_aug2.0_19.1_30004 |
|---|---|
| Locus | scaffold19.1 : 564707 ... 579028 : + |
| To GenomeBrowser | scaffold19.1:564707..579028 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_80581.1_63850 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_30004.t1 | 2 | 1 | AAA_33 | 7 | 25 | 1.9e-06 | 27.8 | 4.1e-06 | 0.0076 | 16.1 |
| pfu_aug2.0_19.1_30004.t1 | 2 | 1 | KTI12 | 8 | 66 | 9.8e-20 | 70.8 | 9.1e-09 | 1.7e-05 | 24.1 |
| pfu_aug2.0_19.1_30004.t1 | 1 | 1 | AAA_17 | 8 | 93 | 2.1e-06 | 28.5 | 1.1e-08 | 2.1e-05 | 25.3 |
| pfu_aug2.0_19.1_30004.t1 | 2 | 2 | KTI12 | 224 | 416 | 9.8e-20 | 70.8 | 2.0e-16 | 3.7e-13 | 49.3 |
| pfu_aug2.0_19.1_30004.t1 | 2 | 2 | AAA_33 | 235 | 325 | 1.9e-06 | 27.8 | 0.00044 | 0.81 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_30004.t1 | gi|677969137|ref|XP_009070324.1| | PREDICTED: L-seryl-tRNA(Sec) kinase, partial [Acanthisitta chloris] | 8.00001e-41 |
| pfu_aug2.0_19.1_30004.t1 | gi|701340196|ref|XP_009968806.1| | PREDICTED: L-seryl-tRNA(Sec) kinase, partial [Tyto alba] | 9.0e-39 |
| pfu_aug2.0_19.1_30004.t1 | gi|556996348|ref|XP_006001800.1| | PREDICTED: L-seryl-tRNA(Sec) kinase [Latimeria chalumnae] | 2.0e-37 |
| pfu_aug2.0_19.1_30004.t1 | gi|611966536|ref|XP_007478915.1| | PREDICTED: L-seryl-tRNA(Sec) kinase isoform X2 [Monodelphis domestica] | 3.0e-37 |
| pfu_aug2.0_19.1_30004.t1 | gi|602627796|ref|XP_007420842.1| | PREDICTED: L-seryl-tRNA(Sec) kinase isoform X1 [Python bivittatus] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_30004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_30004.t1 atgagttctcaggcttgtgtacttgttctgtgtggaatacctgccagtggaaaatccaccacagctaaaaatctacaaca gtattttgacgatcgtattaaagagggaagctttgaccaagaatcgacacagagtcaaggatggatgctcagtaaacaag atacgatttgtgtgatagtatcgtatgatgaactcatctcagaagacttggaacagaaactaattgaaaatgaggaagaa atgaaatggaaagcacaaagagaagttatcataaattgtgtagacgatcttctttgttactttttgaagaacagacaaca gggggaatctgaaatttcgtcccaagaaaagacagtgcggtctgattctcagagcaataagagtgatgtagaatccgata tagaaagaattggtgaatttaagagctcagatgagaatcttgacagtgaattcacaagtgtattatcactaggtgaggga aatgaggtggaagtccaagattttgacggaagagttcagtgtgaaggtaaccgtatcaatcagcaacaactagaaaacag ttcacaagctgtggcatctctgcttaatgaaaaaagaagtataaagaaaaatgaaaatgagacagacgatgatttgaaag attgcatggataaagattatgtgacgataaaatcagaagatgatgaggaaataagaaaaatgaggaatgagttcagttgt aagataacaagtaatatgaagagaaagttggcagaaaacaagttttcaaaccttgtggtcgctattgatgataacatgta ctacagtagtatgagatataagtattatcaactggctaggaaatatacctgtggattctgtcaagtatgttttgatattg atgtaaatacaactttgtcaagaaatgagtgcagaaaggtcagaaagattacagatgatgtgattgttaccatggcgatg aagctggagattcctgacccaaagaagaattcatgggaagagcattccttgataataaatgctgaaaaaattatggtttc tgataatataagtgatgtagtgagttgtatcaagtcagccatggatgaccctgtgatgccaataccagaggttgacgaga gtatcaaggaaaaggacagacgtatatccagggaaaacgtactacatcaggctgaccaggtcatacggaaactgatcaaa cagaccatggtcaaagctaaagatgacaaatgctcacagcagaagaagaaaagtctttccaaggaactgaccgttgtcaa aggtgacttactgagggatattaaagaagggcgattactggcggatttcaatatgtacaattgtggctcgggacttactt cttgtgataccaaattatttgtgaccttgagtgaaatatttcatcagaggatattatga |
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Protein
| Protein ID | pfu_aug2.0_19.1_30004.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_30004.t1 MSSQACVLVLCGIPASGKSTTAKNLQQYFDDRIKEGSFDQESTQSQGWMLSKQDTICVIVSYDELISEDLEQKLIENEEE MKWKAQREVIINCVDDLLCYFLKNRQQGESEISSQEKTVRSDSQSNKSDVESDIERIGEFKSSDENLDSEFTSVLSLGEG NEVEVQDFDGRVQCEGNRINQQQLENSSQAVASLLNEKRSIKKNENETDDDLKDCMDKDYVTIKSEDDEEIRKMRNEFSC KITSNMKRKLAENKFSNLVVAIDDNMYYSSMRYKYYQLARKYTCGFCQVCFDIDVNTTLSRNECRKVRKITDDVIVTMAM KLEIPDPKKNSWEEHSLIINAEKIMVSDNISDVVSCIKSAMDDPVMPIPEVDESIKEKDRRISRENVLHQADQVIRKLIK QTMVKAKDDKCSQQKKKSLSKELTVVKGDLLRDIKEGRLLADFNMYNCGSGLTSCDTKLFVTLSEIFHQRIL |
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