Gene
| Gene Model ID | pfu_aug2.0_19.1_30008 |
|---|---|
| Locus | scaffold19.1 : 719722 ... 741784 : - |
| To GenomeBrowser | scaffold19.1:719722..741784 |
| Genes list of scaffold | scaffold19.1 |
| Synonym | pfu_aug1.0_97958.1_06252 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_19.1_30008.t1 | 6 | 1 | WD40 | 6 | 38 | 0.0 | 174.5 | 5.3e-12 | 2.6e-08 | 33.4 |
| pfu_aug2.0_19.1_30008.t1 | 6 | 2 | WD40 | 42 | 80 | 0.0 | 174.5 | 3.7e-16 | 1.8e-12 | 46.5 |
| pfu_aug2.0_19.1_30008.t1 | 6 | 3 | WD40 | 85 | 122 | 0.0 | 174.5 | 6.4e-12 | 3.2e-08 | 33.1 |
| pfu_aug2.0_19.1_30008.t1 | 6 | 4 | WD40 | 128 | 161 | 0.0 | 174.5 | 4.8e-11 | 2.4e-07 | 30.3 |
| pfu_aug2.0_19.1_30008.t1 | 6 | 5 | WD40 | 161 | 198 | 0.0 | 174.5 | 4.3e-12 | 2.1e-08 | 33.6 |
| pfu_aug2.0_19.1_30008.t1 | 6 | 6 | WD40 | 204 | 216 | 0.0 | 174.5 | 0.032 | 160.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_19.1_30008.t1 | gi|676491066|ref|XP_009065475.1| | hypothetical protein LOTGIDRAFT_236399 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_19.1_30008.t1 | gi|156366072|ref|XP_001626965.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_19.1_30008.t1 | gi|260787161|ref|XP_002588623.1| | hypothetical protein BRAFLDRAFT_287844 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_19.1_30008.t1 | gi|612047897|ref|XP_007502211.1| | PREDICTED: dynein assembly factor with WDR repeat domains 1 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_19.1_30008.t1 | gi|395528109|ref|XP_003766174.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_19.1_30008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_30008.t1 actgctgaacagacagaaggacacagcaatgttgtatatgccatagcttttaataatccttatggggacaaaatagccac tggttctttcgacaaaacttgtaagttatggagtgcggagacagggaaatgttttcataccttccgtggacacaccgctg aaatagtgtgtttaagttttaatcctcagagttctgtggtagctacagggagtatggataccacagccaagctttgggat gtacagacaggtcaagaacttgtctctttaagtggtcattctgctgaaattatttccttatcatttaattccatgggaac agaactcatcacgggatcatttgatcatacggtgtcagtttgggacgtgaagactggaaggaggatacacacgttaatag gtcataaagctgagatcagcagtgcagcatttaactgggattgttccttaatagcaacaggctccatggataaaacatgt cgttgtataggtacattacgaggccatgatgatgaggtgctagatgtagcgtttgactacacaggacaaaagttactgac ggcatcagcagacgggacagcaagatgttataatgctgtaacccataatctattatcaaagtttgaaggccatgagggtg aaatatcaaaagatggcttagttttcctggtgttttatgtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_19.1_30008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_19.1_30008.t1 TAEQTEGHSNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCFHTFRGHTAEIVCLSFNPQSSVVATGSMDTTAKLWD VQTGQELVSLSGHSAEIISLSFNSMGTELITGSFDHTVSVWDVKTGRRIHTLIGHKAEISSAAFNWDCSLIATGSMDKTC RCIGTLRGHDDEVLDVAFDYTGQKLLTASADGTARCYNAVTHNLLSKFEGHEGEISKDGLVFLVFYV |
|