Gene
| Gene Model ID | pfu_aug2.0_1904.1_15302 |
|---|---|
| Locus | scaffold1904.1 : 95080 ... 104795 : - |
| To GenomeBrowser | scaffold1904.1:95080..104795 |
| Genes list of scaffold | scaffold1904.1 |
| Synonym | pfu_aug1.0_3247.1_59179 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1904.1_15302.t1 | 2 | 1 | RVT_1 | 366 | 528 | 2.6e-27 | 95.5 | 3.0e-30 | 2.2e-26 | 92.5 |
| pfu_aug2.0_1904.1_15302.t1 | 2 | 2 | RVT_1 | 528 | 560 | 2.6e-27 | 95.5 | 0.037 | 270.0 | 0.7 |
Transcript
| Transcript ID | pfu_aug2.0_1904.1_15302.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1904.1_15302.t1 atgatggatgtccgccagagtgaaacagagacagtggaggagtattttcaccgagtaacctccagtttggcagacagacc gatagatgaggactggttaattcactcccttgtaaccggactaaaacaggcaatcaagaaacctgtcgttcaagcggatc cacaaacattggaacaacttagaaatgaggcaattaaggcagaaatggcagaaaaactcgcaggtggaagtggacattac attacaacaagtgaacgttcagaacaatcaaaacttgacactatattggacaagataaatagcattgatgtggcagctgt ccagaagaatagggatccgtgcggaaattgtggtgtagattttcttagtacatacaatgttagattgcgtttttcacagc agaataccttggaaatcccagatggcagtgaaccaaaggtttgtgtggttaaagttagtactggcttagctagaactgca aatgcaattacaattccaaaaaaatcagaaattaatataccagttttggtatcacgttgcaaaacaggcgacgaagtgct tttggaaccacggcaaaatttggcaaaattgcacttaatagcagccaaatgtttggttaaagtgcagaagggtaaggcag tcatgcgattgcttaatcctaccaatagtgacattgaattaaagaaaagccatgtactagcttcagtcacagatatccac agtgctcaagtataccctattgaggactcccatagtgcttccttatttgtaggttctgttaacactgatacagtgctaga aactgacatcaagtttgatctctctgattctgaattcacagagcatgaaaaaactgaatttttggcatttttggctagac acaggagtaattttgcaactgacctgagtgaattaggcaagacaaatgtccacaaacatcatattgaaattcaacctggt tccaaaccagttcggttgcaattttaccggacgtcacttcagaattcaaaagaaatttcaaggcaaattgatgatatgga aaagcatggtattataaagccttcgaattctgagtggcattcgcctgttgttctggtaaagaaaaagaatggcactttcc gatttgcatgtgattatagagctctgaataagataacagtgcccatgtcttttcccttacctcacatggaaagtgtcttt gatacaataggggcagccaaagcaaattatttttcaaaattagatttgatgtcaggcttttggcaaatggagctcgacga ggaaagcaggaagaaagcagctttcataacacaaaggggtgtgtatgaatggaccagaatgccatttggtttaactaatg caccaatttcctttcagactttgatgtcgtcagttctgcgtgacctgaactggaagtcagtgctagtgtatgtggatgac attttgattttcagtaattccttccaagagcatttagctcacttagaacaagtctttgataggttaagggaggcaaatct aaaactgcacccttcaaagtgtcatttcgccatgaaacagctcaacttcctaggtcatattatatcacgcaatggtgttg aggtagacccagagaaaacaaaggctatgagtgaatttcccacaccaaggacgcaaaaacatgtgagaagcttccttggt atggcaaattactatagaaggttgagaatgcgcagtagattcacagtacttgaactcgctgttcaagatttggtaaaagg cagaattaccccacacctgattgaccgccctacactaacacaagtcttacatcacctccattctcacataagaaaatctt ttaaacagttctacctcactcacatagatcccaattactactatgctaatgccaagtttgtgtatgctcgcaggggatcc cagctatatgtcactcttaagtttcccttgtcttcacttaacaaaccccttaacctctacaaagttatctctcttcctgt cccagttaaaaacaattcttccttaaccatgcatgccacccagcttcactctctccctgactacttcgctattacccctc accatgaccactatcttcaactttcatctaaagacttggttaactgtcagcatgattctgtaatactgtgcgacatgaat cttgccttaacgcccataacagtaccagactgcactatggttcttttttctaataatccagtccagatcaaaaagttgtg cgactttcggtttactcaatcattgctgagaccaaatattattgaactgacagcaacatctgcacttgtatacaactcag ataacttagtgttgaattgtccaaaggaacagaaaatagttccaggttgcaatttttgtgttgtacatattccatgtaga tgttcactatcaactaaaacattgtttttcttacctacattggtagattgctataattcatcagaaaccatgaccatggt tcaccccgttaatttagccttattacaggaattctttgatgagaccaagctaatgaatatttttggagataccaccttta caaaacctattaacctttctgttccagaatttcaattttataatcattcattttcaagcatagttgccaatgaccaaaca gcacatctgagtttgaagaaaatagcaaaagctgttaaaaatgaccaaaagattttcaaaactctggctgaacctttgtt agatggtgttatatctatttctgctgattggcatgacctgaatgccattttagcattttcatcataa |
|
Protein
| Protein ID | pfu_aug2.0_1904.1_15302.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1904.1_15302.t1 MMDVRQSETETVEEYFHRVTSSLADRPIDEDWLIHSLVTGLKQAIKKPVVQADPQTLEQLRNEAIKAEMAEKLAGGSGHY ITTSERSEQSKLDTILDKINSIDVAAVQKNRDPCGNCGVDFLSTYNVRLRFSQQNTLEIPDGSEPKVCVVKVSTGLARTA NAITIPKKSEINIPVLVSRCKTGDEVLLEPRQNLAKLHLIAAKCLVKVQKGKAVMRLLNPTNSDIELKKSHVLASVTDIH SAQVYPIEDSHSASLFVGSVNTDTVLETDIKFDLSDSEFTEHEKTEFLAFLARHRSNFATDLSELGKTNVHKHHIEIQPG SKPVRLQFYRTSLQNSKEISRQIDDMEKHGIIKPSNSEWHSPVVLVKKKNGTFRFACDYRALNKITVPMSFPLPHMESVF DTIGAAKANYFSKLDLMSGFWQMELDEESRKKAAFITQRGVYEWTRMPFGLTNAPISFQTLMSSVLRDLNWKSVLVYVDD ILIFSNSFQEHLAHLEQVFDRLREANLKLHPSKCHFAMKQLNFLGHIISRNGVEVDPEKTKAMSEFPTPRTQKHVRSFLG MANYYRRLRMRSRFTVLELAVQDLVKGRITPHLIDRPTLTQVLHHLHSHIRKSFKQFYLTHIDPNYYYANAKFVYARRGS QLYVTLKFPLSSLNKPLNLYKVISLPVPVKNNSSLTMHATQLHSLPDYFAITPHHDHYLQLSSKDLVNCQHDSVILCDMN LALTPITVPDCTMVLFSNNPVQIKKLCDFRFTQSLLRPNIIELTATSALVYNSDNLVLNCPKEQKIVPGCNFCVVHIPCR CSLSTKTLFFLPTLVDCYNSSETMTMVHPVNLALLQEFFDETKLMNIFGDTTFTKPINLSVPEFQFYNHSFSSIVANDQT AHLSLKKIAKAVKNDQKIFKTLAEPLLDGVISISADWHDLNAILAFSS |
|