Gene
| Gene Model ID | pfu_aug2.0_1914.1_15305 |
|---|---|
| Locus | scaffold1914.1 : 18889 ... 26365 : - |
| To GenomeBrowser | scaffold1914.1:18889..26365 |
| Genes list of scaffold | scaffold1914.1 |
| Synonym | pfu_aug1.0_6151.1_23959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1914.1_15305.t1 | 1 | 1 | mRNA_cap_enzyme | 64 | 175 | 4.3e-06 | 26.5 | 5.3e-10 | 7.8e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1914.1_15305.t1 | gi|733904410|ref|XP_003213883.2| | PREDICTED: LOW QUALITY PROTEIN: snurportin-1, partial [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_1914.1_15305.t1 | gi|124249356|ref|NP_001074347.1| | snurportin-1 [Gallus gallus] | 0.0 |
| pfu_aug2.0_1914.1_15305.t1 | gi|543256727|ref|XP_005419839.1| | PREDICTED: snurportin-1 [Geospiza fortis] | 0.0 |
| pfu_aug2.0_1914.1_15305.t1 | gi|704460523|ref|XP_010081884.1| | PREDICTED: snurportin-1, partial [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_1914.1_15305.t1 | gi|723555683|ref|XP_010299889.1| | PREDICTED: snurportin-1, partial [Balearica regulorum gibbericeps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1914.1_15305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15305.t1 atgttctctgaatggttgacagaggtgccacaggacatgcctgataactggtttgtgatcgcatgtccaacaggaaagcg ccatctattgatggcctcaaatgggcagacagtgactcagtcaaaaagtggagtgatagtgagtgcctttaattcccttc taccaggaggatacccatatagtacatgtgataaagatatgtgtattttggatactatatacaataagcagcaggataca tattatatcatggatggtataacatggacgacacaggtgctttatgattgtgaggcagaatttcgattctactggttacg agagatggtgagagagattagaggtctctctaagatgtcaagaaataacggtcatgccataaggttgttgaacacatttc cagccacagagaaaggaataacacaggctctacagtcagccgtttatgatgttgatggtgtattattcttcaaaagaaat gcaccgtacaaagcaggagcgactgaaaatgtgttgtggttaaagccatatatgattccagactttttctccagnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtggatgttccaaaagaacttgataacaggagaccacag aactatgatcctgaggcacataaggcaaaagtagaaaaggagaaaaaggagcgtaaatcaaatcaatctgttgccaggag acgacgtattgaagaaaggccaattgatttagatcgtttggtagacgatattgcaaagatgtatattgcaaagcagcaag gcaaaggagacgctattagaaaaagacaagagagagatctggaagcacgaatgcaggcacaaagaaatcagccacaaaga aatcaggcacagatgcaaaactatggttactatgatgatggttaccaaggttatgatcaagggtattatgggtatggagg aatgatgggatatggtggttatcaaggcaatacaggatatgatcaaggtatgatgggttatcagcaaggcatgatgggta gaggaaactggggctacgaggcccatggaaggaatcaaggaggtcgtggaagaggattaaagccaatgaccgcttatcat caaactcataccaagtttacaagataa |
|
Protein
| Protein ID | pfu_aug2.0_1914.1_15305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15305.t1 MFSEWLTEVPQDMPDNWFVIACPTGKRHLLMASNGQTVTQSKSGVIVSAFNSLLPGGYPYSTCDKDMCILDTIYNKQQDT YYIMDGITWTTQVLYDCEAEFRFYWLREMVREIRGLSKMSRNNGHAIRLLNTFPATEKGITQALQSAVYDVDGVLFFKRN APYKAGATENVLWLKPYMIPDFFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVPKELDNRRPQ NYDPEAHKAKVEKEKKERKSNQSVARRRRIEERPIDLDRLVDDIAKMYIAKQQGKGDAIRKRQERDLEARMQAQRNQPQR NQAQMQNYGYYDDGYQGYDQGYYGYGGMMGYGGYQGNTGYDQGMMGYQQGMMGRGNWGYEAHGRNQGGRGRGLKPMTAYH QTHTKFTR |
|