Gene
| Gene Model ID | pfu_aug2.0_1914.1_15306 |
|---|---|
| Locus | scaffold1914.1 : 30317 ... 47414 : - |
| To GenomeBrowser | scaffold1914.1:30317..47414 |
| Genes list of scaffold | scaffold1914.1 |
| Synonym | pfu_aug1.0_21879.1_54789 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| snurportin-1 isoform x2 | GO:0000339 GO:0000387 GO:0005643 GO:0005829 GO:0006810 GO:0034660 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1914.1_15306.t1 | 1 | 1 | Snurportin1 | 25 | 63 | 7.3e-11 | 41.6 | 2.5e-14 | 1.9e-10 | 40.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1914.1_15306.t1 | gi|676477465|ref|XP_009061121.1| | hypothetical protein LOTGIDRAFT_126607 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1914.1_15306.t1 | gi|524871938|ref|XP_005092739.1| | PREDICTED: snurportin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1914.1_15306.t1 | gi|348520100|ref|XP_003447567.1| | PREDICTED: snurportin-1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_1914.1_15306.t1 | gi|734612097|ref|XP_010733486.1| | PREDICTED: snurportin-1 isoform X2 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_1914.1_15306.t1 | gi|5031833|ref|NP_005692.1| | snurportin-1 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1914.1_15306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15306.t1 atggatgaactcacacagcagttagcagggagttttactgtgtccaatgacccaaactcaacagctgcacagcatccgag gtttgctcagtacaaaagtcgcacgtccgtggatcaaaatacccggagagatcgaatcttgaatcaccagaaagaacgta gatttgactttatgagccatgtacgtaacttatcagatgacttatgggataatactgatgctgaatcggtgggatctgag gattccatggacgtacagtttgaaggagagaaaccaaagtttaggaaacctggaaagtattacagaaatcagttgatgta ctctgagtggttagtggaggtaccgtcagactttgaacaggagtggttagctgtggtgtgtccctggggaaaaagatgtc ttgttgtcgcatctaagggaagaacacatgcctactccaagagtggttacaggatcaattctttttcctcacatctccca ggtggaagctttaagcagaagggaaggaacaaagacaatgccattttggattgcttgtttaatgaacaggaagggacgta ctatgtattagatataatgtgttggaaaaatcaccctatctatgacagtgagactgaattccgattctactggctagcta gtaaagtgatagaaactccagaaatggcccagaaatctccagataatacgtataacttcatcccactacctaattatcca tgtacaaaggatgccataacccatgcagtcaatacagctacatttgatattgatggagttctattttaccacaagcgttg tcattacacctttggatccaccccacttgttgtatggttgaagccctacatgcttcctgagatcctgactatcgagatca atgagaagttagcggctgagcgacctgacagctacaccacatacgcagctcacatggatcacgtacagaaagagaaggag aaggcagctttagagaagagcaaaaaggggaaaagtccacatggcaaaaagaaaacacctaaaaagacgaagggttcagg cgatgctggagaggggccaggaatggtgcaagtagacaatactgtaggactacctgatcctaaacctgtgaagaaagacc gagtggacgagaagaggatctatggacaggatttccgtatggatgtgagtgtagaaccccatggcgatggtgaccatggc gatactatggatacaatccatgaaaacgagggggatttgtcctag |
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Protein
| Protein ID | pfu_aug2.0_1914.1_15306.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15306.t1 MDELTQQLAGSFTVSNDPNSTAAQHPRFAQYKSRTSVDQNTRRDRILNHQKERRFDFMSHVRNLSDDLWDNTDAESVGSE DSMDVQFEGEKPKFRKPGKYYRNQLMYSEWLVEVPSDFEQEWLAVVCPWGKRCLVVASKGRTHAYSKSGYRINSFSSHLP GGSFKQKGRNKDNAILDCLFNEQEGTYYVLDIMCWKNHPIYDSETEFRFYWLASKVIETPEMAQKSPDNTYNFIPLPNYP CTKDAITHAVNTATFDIDGVLFYHKRCHYTFGSTPLVVWLKPYMLPEILTIEINEKLAAERPDSYTTYAAHMDHVQKEKE KAALEKSKKGKSPHGKKKTPKKTKGSGDAGEGPGMVQVDNTVGLPDPKPVKKDRVDEKRIYGQDFRMDVSVEPHGDGDHG DTMDTIHENEGDLS |
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