Gene
| Gene Model ID | pfu_aug2.0_1914.1_15309 |
|---|---|
| Locus | scaffold1914.1 : 88810 ... 98415 : - |
| To GenomeBrowser | scaffold1914.1:88810..98415 |
| Genes list of scaffold | scaffold1914.1 |
| Synonym | pfu_aug1.0_16692.1_03744 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1914.1_15309.t1 | 1 | 1 | 7tm_1 | 15 | 184 | 9.4e-17 | 60.9 | 8.1e-21 | 1.2e-16 | 60.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1914.1_15309.t1 | gi|260828153|ref|XP_002609028.1| | hypothetical protein BRAFLDRAFT_84844 [Branchiostoma floridae] | 8.0e-35 |
| pfu_aug2.0_1914.1_15309.t1 | gi|676453937|ref|XP_009053517.1| | hypothetical protein LOTGIDRAFT_116468, partial [Lottia gigantea] | 2.0e-31 |
| pfu_aug2.0_1914.1_15309.t1 | gi|676469943|ref|XP_009058695.1| | hypothetical protein LOTGIDRAFT_123097, partial [Lottia gigantea] | 2.0e-31 |
| pfu_aug2.0_1914.1_15309.t1 | gi|676469946|ref|XP_009058696.1| | hypothetical protein LOTGIDRAFT_122769, partial [Lottia gigantea] | 3.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_1914.1_15309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15309.t1 atgtgtgttgcagatcgcgtttaatatcttttaaaagaaagatcgaacatcaagtgggtgctgattgcaatatgggcata ttctttgatatggaccggacctcccttgattggctggagcaaatatacattggagaagtatggtacctcctgtacgatca actggtatggccgggaaatcggggacttgtcttataacacagttatcacatttacttgcttcgtggtccatgccaccatt ttcatcttctgctactctaacatcatcagacaatacaaagttgcagacaacctgaaggaccgcacagtgacggcagatga tgacaacgagaactccatgaacatagaggatgttgtctggtaccacaaagtcaccacatccagaagtattactttgactt cccttggaatgatatcggcatataccttagcatggactccctacgccatcatcagtatatgggtgatgtatatatccgat gtcccagtgtggattcacgttctacctacgatgatgggaaagtcagcgtgtctggtcaatcctatcgtttatggtatttg tagtgagaacttcagaaaagcagtgaaagccttgtttgtaaagagagttgtccatccaagagctcaaagtggtatagaga tggaggagaatgacccgaatacatccaggaacgactcatcagcaggacgatcaggtaatgttaaacggactttcaagact tacgctggacacatgaaagtgaaaccaggggtgtacataggtaaagccgagatccagcttccggtagaggactacgctat atga |
|
Protein
| Protein ID | pfu_aug2.0_1914.1_15309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1914.1_15309.t1 MCVADRVXYLLKERSNIKWVLIAIWAYSLIWTGPPLIGWSKYTLEKYGTSCTINWYGREIGDLSYNTVITFTCFVVHATI FIFCYSNIIRQYKVADNLKDRTVTADDDNENSMNIEDVVWYHKVTTSRSITLTSLGMISAYTLAWTPYAIISIWVMYISD VPVWIHVLPTMMGKSACLVNPIVYGICSENFRKAVKALFVKRVVHPRAQSGIEMEENDPNTSRNDSSAGRSGNVKRTFKT YAGHMKVKPGVYIGKAEIQLPVEDYAI |
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