Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1919.1_31964
Locus scaffold1919.1 : 96310 ... 100465 : -
To GenomeBrowser scaffold1919.1:96310..100465
Genes list of scaffold scaffold1919.1
Synonym pfu_aug1.0_197449.1_14165

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1919.1_31964.t1 1 1 C1q 19 145 2.4e-21 76.0 1.8e-25 2.7e-21 75.8

Transcript
Transcript IDpfu_aug2.0_1919.1_31964.t1
Definition-
>pfu_aug2.0_1919.1_31964.t1
atgattgtcgtaacgacaaggggacagatatgcagtaatccagaaaaagtctatttcagcgcttggaattccagaaattt
gaataatatcatagggcgcagcacgattatctacgacaaagtcttttcaaatgaagggaatgcatacaacgcaacaacag
ggaagtttacagcccctaaggacggacctttcgtcttcacatggacggctttgactattgacaaattttcactcaacgtg
ttcatctggcacaatggcaagagactgagtgtggcacaggctgacagcgacaaagaaacccaaaacagttccggatcgaa
cactatagtactgaaactaaaaaaagacgacgttgtggaactgaaatgtggactatggaatgacaacaaactacatatgc
tatatggggatgcccactctaccttctctggttgggaattgtaa

Protein
Protein IDpfu_aug2.0_1919.1_31964.t1
Definition-
>pfu_aug2.0_1919.1_31964.t1
MIVVTTRGQICSNPEKVYFSAWNSRNLNNIIGRSTIIYDKVFSNEGNAYNATTGKFTAPKDGPFVFTWTALTIDKFSLNV
FIWHNGKRLSVAQADSDKETQNSSGSNTIVLKLKKDDVVELKCGLWNDNKLHMLYGDAHSTFSGWEL

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