Gene
| Gene Model ID | pfu_aug2.0_1921.1_05317 |
|---|---|
| Locus | scaffold1921.1 : 56291 ... 77425 : - |
| To GenomeBrowser | scaffold1921.1:56291..77425 |
| Genes list of scaffold | scaffold1921.1 |
| Synonym | pfu_aug1.0_7.1_14676 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1921.1_05317.t1 | 1 | 1 | PDZ | 6 | 69 | 1.6e-07 | 31.4 | 1.5e-10 | 3.7e-07 | 30.2 |
| pfu_aug2.0_1921.1_05317.t1 | 1 | 1 | SH3_2 | 90 | 148 | 1.9e-06 | 27.2 | 1.9e-09 | 4.8e-06 | 25.9 |
| pfu_aug2.0_1921.1_05317.t1 | 1 | 1 | SH3_1 | 105 | 143 | 1.6e-06 | 27.4 | 1.7e-09 | 4.2e-06 | 26.0 |
| pfu_aug2.0_1921.1_05317.t1 | 1 | 1 | Guanylate_kin | 205 | 404 | 0.0 | 157.1 | 0.0 | 2.52234e-44 | 150.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1921.1_05317.t1 | gi|676478151|ref|XP_009061342.1| | hypothetical protein LOTGIDRAFT_193889 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1921.1_05317.t1 | gi|524879191|ref|XP_005096273.1| | PREDICTED: MAGUK p55 subfamily member 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1921.1_05317.t1 | gi|675884954|ref|XP_009027979.1| | hypothetical protein HELRODRAFT_186050 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1921.1_05317.t1 | gi|597742674|ref|XP_007233440.1| | PREDICTED: MAGUK p55 subfamily member 6 isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1921.1_05317.t1 | gi|158296795|ref|XP_317142.4| | AGAP008321-PA [Anopheles gambiae str. PEST] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1921.1_05317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1921.1_05317.t1 atggtcgatgagcatggaatcacagtaaagattgatgaacatgcagagttgaaagtagccagaattctagctggaagtat gatagacaaacagggtttgcttcacgtaaacgacatcataaaggaagtgaacggtataccagtatgcactcccgaacact taatggacgtcatacgttgttccgatggtaacatcactcttaagataattcctgccattgtagaggagcaccatcattct cagctttacctgaggtcccacatcagttatgacccggccaaggacagactattaccgtgtaaagacgcaggcttaccatt cagagacggtgatattttacatgtgttgaacaatgaggacccaagctggtggcaggcccgtatggtaatgcctgatggta cggacggagatacaggactcatcccatcccagcagctggaagaaaaaagacgggcgtatgtacagccagattacgactac tcaaagagcagtttgttatgtggtttgaagaagaggaagcaaaagaaagtaaaatattccatgaaaaatcacaaagattt tgacaaagcagaaataacaatctatgaggaggtcacacgtatgccgccattccagaggaaaacgttgattttggtagggg ctgcaggtgtaggtaggagggcattaaaagagcgactgttacgtgacgatcccagacgtttcggagcagtaatgccacat acctcacgaccccccagggacggagaagagcacgggaagggatatttcttcactgacatagacactatgcaaaacgacat aaagaatggaaaatatttggagtacggagaatttaacgggaatttatacgggacaaagttagattccatccatcatacaa cctctctgggcaaaatgtgtgtgttagacatcaaccccacgtccttgaaagttttgaaaactggggaatacatgccattt gttgtcttcattgcggcaccaagcactgatgcagctagaattatgtgggaagaggggaagagaaggggcgtagccggaaa acgagggactcagggcaagggaaccatggaatttaaaacggagcgtgacttcctaaagatgatagatgagagtgcccaag ttgagagagtttataaacaattctttgacttaacaattgtgaatgataatttcgatgagacataccggcagcttcgacga gcactagacgagctgagcagtacgacacaatgggtccccgtcaactgggtgtacagttag |
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Protein
| Protein ID | pfu_aug2.0_1921.1_05317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1921.1_05317.t1 MVDEHGITVKIDEHAELKVARILAGSMIDKQGLLHVNDIIKEVNGIPVCTPEHLMDVIRCSDGNITLKIIPAIVEEHHHS QLYLRSHISYDPAKDRLLPCKDAGLPFRDGDILHVLNNEDPSWWQARMVMPDGTDGDTGLIPSQQLEEKRRAYVQPDYDY SKSSLLCGLKKRKQKKVKYSMKNHKDFDKAEITIYEEVTRMPPFQRKTLILVGAAGVGRRALKERLLRDDPRRFGAVMPH TSRPPRDGEEHGKGYFFTDIDTMQNDIKNGKYLEYGEFNGNLYGTKLDSIHHTTSLGKMCVLDINPTSLKVLKTGEYMPF VVFIAAPSTDAARIMWEEGKRRGVAGKRGTQGKGTMEFKTERDFLKMIDESAQVERVYKQFFDLTIVNDNFDETYRQLRR ALDELSSTTQWVPVNWVYS |
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